Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03623 ATGGTTTCAAGGTCATATTCTAATTTGTTAGAGCTTACTTCGTGTGACTCGCCGACTTTCAGCCGCGAAAAGAAAAGGCTTCCTCGAGTGGCAACTGTTGCTGGAGTGCTGTCTGAGCTAGACGACGAGGCAAGCAACAGTGCTGGTTCGGACGCTCCATCCTCAATCTCTCAAGATAGGATGATCATAGTAGGTAACCAGCTTCCATTAAAGGCACAAAGAAAAGACGATGGTACGTGGGACTTCACATGGGACGAGGACTCACTTCTTTTGCAGCTCAAAGATGGTCTTGGTGAAGATGTAGAAACTATTTATATTGGTTGTCTGAAGGAAGAAATCGAGCCGAGCGAGCAAGATGATGTTGCTCAGAACTTGCTTGACACATTCAAATGTGTTCCCACTTTCCTCCCTCCAGAGCTTTTTACCAAATTCTATCACGGATTTTGCAAACAGCATCTGTGGCCTTTGTTTCACTACATGCTTCCGCTCTCGCCTGATCTCGGTGGTCGATTTGATAGGTCCCTTTGGCAAGCTTATGTTTCTGTTAACAAGATATTTGCTGATAAAGTAATGGAAGTCATTAGCCCTGATGATGATTTTGTATGGGTTCATGATTACCATCTCATGGTTCTTCCAACATTTCTGAGAAAGAGGTTCAATAGGGCAAGGCTAGGATTCTTCCTTCACAGTCCATTCCCTTCTTCCGAGATATACCGAACCCTCCCAGTTAGGGATGAGCTTCTTAGAGCTCTTTTGAATTCTGACCTTATTGGATTTCATACTTTTGATTATGCGAGGCATTTCCTTTCTTGCTGCAGTAGAATGCTTGGCCTTTCCTATCAATCCAAGCGGGGCTACATTGGTCTCGAGTACTATGGAAGAACAGTAAGCATCAAGATTCTTCCTGTTGGGATTCACATAGGGCAGCTTCAGTCAGTCATGAATCTTCCTGAGACGGAAAACAAGGTTGAAGAGTTACAAAACAAGTTCAGAGGTCAAACTGTGATGCTTGGGGTTGACGACATGGATATCTTTAAAGGAATCAGCTTAAAACTCTTGGCTATGGAACAGTTGCTTTTACAACATCCTGACAAGAGGGGCAGGGTTGTTTTGGTCCAAATTGCAAACCCTGCAAGAGGCCGTGGGAAAGATGTACAGGAGGTCCAGAGTGAAACTTATGCCACAGTGAAAAGGATCAATAGTACATTTGGAAGGCCTGGATACACACCTGTAATATTGATTGATACGCCACTTCAGTTTTATGAGAGGATAGCTTATTATGTGATAGCTGAATGTTGCCTTGTTACAGCAGTGAGAGATGGTATGAACCTTATACCCTATGAATACATCATTTGTAGACAAGGAAGTGACAAGATAGATAAGATTCTAGGGACAAGCTCATTTACCCAAAAGAAGAGCATGCTGGTGGTGTCTGAGTTCATTGGCTGCTCCCCATCATTAAGTGGGGCAATTAGAGTGAATCCCTGGAATATTGATGCTGTTGCTGAAGCAATGGATTCGGCACTTATCGTCCCAGAGTCCGAAAAACAGATGCGCCACGAGAAGCATTATAGGTATGTCAGTACTCATGATGTTGCATATTGGGCGCGGAGCTTCTTGCAGGATCTGGAAAGGGCATGTAGGGATCATCTGAGAAGGAGATGCTGGGGAATTGGCTTTGGTTTAGGATTTCGGGTTATTGCTTTGGATCCAAACTTTAGAAAGCTATCAGTGGAACATATTGTATCAGCTTATAAGAGGACCAAACACCGAGCCATTCTTTTGGATTATGATGGTACCATGATGCAGCCTGGTTCAATTAGTACAACACCTAGCACTGAGGCTGTTGCCATCTTGAACAGCTTGTGCAAGGACACCAAGAATTGTGTTTTCATTGTAAGTGGAAAGGAGAGAAAAACTCTTACTGACTGGTTTTCCTCTTGTGAAAGGCTTGGAGTTGCAGCAGAGCATGGTTATTTCGTGAGGACAAATCATAGTGCAGACTGGGAAGAATGTGTTTCTGTGCCGGATTTCGACTGGAAGCAGATTGCCGAGCCAGTAATGCAGTTGTACACGGAAACAACTGATGGTTCTAACATAGAGACCAAAGAAACTGCTCTTGTTTGGAATTATGAGTTTGCTGACCGAGATTTCGGTTCATGCCAGGCTAAGGAGCTTCTGGATCATCTGGAAAGTGTTCTTGCCAATGAGCCTGTTTCTGTTAAAAGTAGTCCTCACATCGTGGAAGTCAAACCTCAGGGGGTGAGCAAGGGTATTGTTGCAGAACGCCTTCTCTTAACAATGCAACAAATGGGAGTGATCCCAGATTTTGTTCTATGCATTGGAGATGACAGGTCAGATGAGGACATGTTTGGTGTAATAATGAATGCAAGGGCATCCCTCTCTCCGGTCGCAGAGGTGTTTCCTTGCACCGTCGGTCAGAAGCCGAGCAAGGCCAAGTATTACTTGGAAGACACAAGTGAGATTCTGAGAATGTTGCAGGGGCTTGCCAATGCTTCAGAGCAGTCTGTTACAAGTTCTCCACAGCCTCCTCATGTAGCATCCTGA 2568 0.4439 MVSRSYSNLLELTSCDSPTFSREKKRLPRVATVAGVLSELDDEASNSAGSDAPSSISQDRMIIVGNQLPLKAQRKDDGTWDFTWDEDSLLLQLKDGLGEDVETIYIGCLKEEIEPSEQDDVAQNLLDTFKCVPTFLPPELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRARLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLPETENKVEELQNKFRGQTVMLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGRVVLVQIANPARGRGKDVQEVQSETYATVKRINSTFGRPGYTPVILIDTPLQFYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGSDKIDKILGTSSFTQKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALIVPESEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMMQPGSISTTPSTEAVAILNSLCKDTKNCVFIVSGKERKTLTDWFSSCERLGVAAEHGYFVRTNHSADWEECVSVPDFDWKQIAEPVMQLYTETTDGSNIETKETALVWNYEFADRDFGSCQAKELLDHLESVLANEPVSVKSSPHIVEVKPQGVSKGIVAERLLLTMQQMGVIPDFVLCIGDDRSDEDMFGVIMNARASLSPVAEVFPCTVGQKPSKAKYYLEDTSEILRMLQGLANASEQSVTSSPQPPHVAS 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03623 855 NCBIfam trehalose-phosphatase 589 837 IPR003337 GO:0003824|GO:0005992
Arst9g03623 855 CDD HAD_TPP 592 828 - -
Arst9g03623 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 838 IPR001830 GO:0003824|GO:0005992
Arst9g03623 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 838 IPR001830 GO:0003824|GO:0005992
Arst9g03623 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Arst9g03623 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Arst9g03623 855 FunFam Trehalose-6-phosphate synthase 2 674 753 - -
Arst9g03623 855 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Arst9g03623 855 Gene3D - 716 849 IPR023214 -
Arst9g03623 855 Gene3D - 590 702 IPR023214 -
Arst9g03623 855 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Arst9g03623 855 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Arst9g03623 855 Gene3D Glycogen Phosphorylase B; 313 528 - -
Arst9g03623 855 NCBIfam HAD-IIB family hydrolase 593 795 IPR006379 -
Arst9g03623 855 SUPERFAMILY HAD-like 591 837 IPR036412 -
Arst9g03623 855 Gene3D Glycogen Phosphorylase B; 53 312 - -
Arst9g03623 855 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 849 - -
Arst9g03623 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Arst9g03623 855 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03623 Arst-Chr9 112506863 112511139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03623 1 850 Trehalose Biosynthesis Gene Families AT4G17770 78.530 0.0 1428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03623 K16055 - gmx:100808051 1583.93