Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03558 ATGGTGGCTTTTGGCGGGAAAAAGATGCGCCAAATGGTTGTTGGCTTCGGTGGAAGTGGCATCGGCCAGGTCGTTGCCGCCGTCGCCGTTTCCTTCCTCCTCCGCCTGTTCACTTCTCCCGGTCCCGCACTCCCTCCGGACGATGAAGATAATGACGGCGGCTACGAGGTGCCGGAGAACGGCATCCACGACGCGGAAGCTCCGCCTTCCGGAAAGGTTACGCCGGTTACAATCCGATGGAACAACATCAATTGCTCCCTTTCCGATAAATCGTCCAAGTCCGTGAGGATTTTGCTGAAAAATGTGAGTGGAGAAGCAAAACCTGGAAGGTTGCTAGCTATAATGGGGCCTTCGGGTTCAGGGAAGACAACTCTGCTTAATGTTCTTGCAGGCCAGTTGGCAGCATCGCCTCGGTTGCATTTGTCAGGCCGTTTGGAGTTCAATGGAAAGCCTAGTTCAAGGAACACTTACAAGTTTGCTTATGTGAGGCAGGAGGATCTCTTCTTCTCACAACTCACTGTTCGGGAAACATTGTCTCTTGCTATAGAACTCCAGCTTCCCCACATTTCATCTGCAGAAGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAACTAGGCTTGGTCAGTTGTGCTGATACCAATGTTGGTGATGCGAAAGTTCGTGGAATCAGTGGTGGTGAAAAGAAACGCTTATCCTTGGCATGTGAATTACTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAAGCTGAGAAAGTCGTGGAAACTCTTCAACAACTTGCCCAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTACAGTAAATTCGATGACATTGTCTTGCTAACAGAGGGTTCACTTGTGTATGCTGGTCCTGCCCATGATGAACCATTGGCATACTTCTCAAAATTTGGCAATTGGCTGATAATTGTCCATATANNNNNNNNTATATCTGTAGACTACAGTTCTGCTGATAGTGTTTATTCCTCTCGAAAAAGGATCGATGGTCTTGTCGAGTCATTCTCGCAAAGGCTATCTACATCTTTTATAATATATGCAACTCCAATTACTGTAGATGAGCTCTCAAAAAGTAGAAAGAAAATCAGTAGGAGGACTATTGTGCAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTTCTTAGGCGAGCATGGATGCAGGCTTCCCGAGATGTACCAACAAACAAAGTTCGAGCAAGGATGTCAATAGCATCAGCAATTATCTTCGGTTCAGTTTTCTGGAGAATGGGAAATTCCCAGACTTCAATACAAGACAGAATGGGATTACTTCAGGTAGCCGCAATAAATACAGCTATGGCAGCTCTCACAAAGACTGTTGGTGTATTTCCAAAGGAACGCGCCATTGTTGATAGAGAACGTGCAAAAGGCTCCTATTCTTTGGGTCCCTATCTGTTCTCAAAATTGTTAGCAGAGATTCCGATTGGAGCCTCATTTCCATTGATGTTTGGTGCTGTTTTATACCCAATGGCTCGTCTTCATCCTACTTTGCTCAGATTTGGGAAATTCTGTGGAATTGTCACCATGGAGTCTTTTGCTGCATCTGCAATGGGTCTCACTGTTGGTGCTATGGTTCCAACCACCGAAGCTGCAATGGCGGTAGGCCCATCTCTTATGACAGTTTTTATTGTATTTGGAGGCTACTATGTCAATCCTGAGAATACCCCCATCATCTTCCGTTGGATTCCCAGCGTTTCTCTAATTAGATGGGCCTTCCAAGGACTTTGCATCAATGAATTTAGCGGTCTTCAATTTGAGCATCAGAATTCTTTTGACATTCAAACTGGAGAACAGGCACTTGAGCGCCTTTCCTTTGGAAAAAGTAGGATTAGTGATACAGTGTTAGCACAAAATAGAATACTGTTCTTCTGGTATTGCACCACCTACCTTCTCCTTGAGAAAAACAAGCCTAAATTCCAGCAACTTGAGCCAATCCCACTTGAACAAAACAAAACACACTTCAAACTCGAGGAATTAAACCCTGAACAAGTTGATCAGACACTTGAATCTCAACCTGTCAGCCAAGATGGATCCAACCAGCCTCTTGAGTCACCTGAAGTGGATCCTATTGGTCCATTTGTCTTAGAAGGTACTAAGTAA 2184 0.4469 MVAFGGKKMRQMVVGFGGSGIGQVVAAVAVSFLLRLFTSPGPALPPDDEDNDGGYEVPENGIHDAEAPPSGKVTPVTIRWNNINCSLSDKSSKSVRILLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLAASPRLHLSGRLEFNGKPSSRNTYKFAYVRQEDLFFSQLTVRETLSLAIELQLPHISSAEERDEYVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVVETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSLVYAGPAHDEPLAYFSKFGNWLIIVHIXXXISVDYSSADSVYSSRKRIDGLVESFSQRLSTSFIIYATPITVDELSKSRKKISRRTIVQKKGGWWKQFWLLLRRAWMQASRDVPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGASFPLMFGAVLYPMARLHPTLLRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRWAFQGLCINEFSGLQFEHQNSFDIQTGEQALERLSFGKSRISDTVLAQNRILFFWYCTTYLLLEKNKPKFQQLEPIPLEQNKTHFKLEELNPEQVDQTLESQPVSQDGSNQPLESPEVDPIGPFVLEGTK 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03558 727 MobiDBLite consensus disorder prediction 684 727 - -
Arst9g03558 727 Gene3D - 71 314 IPR027417 -
Arst9g03558 727 CDD ABCG_EPDR 75 306 - -
Arst9g03558 727 ProSitePatterns ABC transporters family signature. 224 238 IPR017871 GO:0005524|GO:0016887
Arst9g03558 727 MobiDBLite consensus disorder prediction 43 73 - -
Arst9g03558 727 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 74 626 - -
Arst9g03558 727 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 324 IPR003439 GO:0005524
Arst9g03558 727 Pfam ABC-2 type transporter 398 608 IPR013525 GO:0016020|GO:0140359
Arst9g03558 727 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 310 IPR027417 -
Arst9g03558 727 MobiDBLite consensus disorder prediction 691 710 - -
Arst9g03558 727 FunFam ABC transporter G family member 7 76 314 - -
Arst9g03558 727 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Arst9g03558 727 SMART AAA_5 108 301 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03558 Arst-Chr9 112020470 112026441 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03558 84 321 Calmodulin-binding Proteins AT2G36910 29.032 2.07e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03558 K05681 - gmx:100788256 1210.67