Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03548 ATGGAATCGGTCCCTGGTGATGTATCAAATTTACCTCCTAGTAAAGACCCATCTCCTTCACCTCCAGTCAAAGAGACCGATGGACAAGCTTCTTCAGCTCCTGTAGCCTTTGGGCAAGATAGTTCTGGACATGTGGCACCATCTAAGCCATCCTCCACCGGGGCATCATCTTGGGCCAAAAACTTGAACATTTCTCAGCCATCTGGCTCACAAGATGACCCATCCACTGGAAATGCTGGGAAATCAACCTTTGCTCGCTTAACCAGTAATTTGGGATTGCGTTTGTCACCAAAGTCTCCTCCGGCAGATGACAGTTCCAATGAGACACCAGCACAATCTAATATTTTTGGAAGTATCACAAGAGGTTTGGTTGACACTTCTAAGAATGCAGTGAAAGCTGTCCAGGTTAAGGCACGACATGTCGTTTCTCAGAATAAACGCAGATATCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACAGAAAACATCATTGCTATGGGGTTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGTTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTTATTAAGTTTTTTGAGACTCACCATAAGGATAAATACAAAGTATACAATCTTTGTTCTGAGCGGCTGTATGATGCATCATTGTTTGAGGGGAAGGTGGCTAGCTTTCCATTTGATGACCATAATTGCCCCCCACTTCAACTGGTTATCTCATTCTGTCATAGTGCATACTCGTGGTTGAAGTTAGATATTGAGAATGTTGTAGTTGTCCACTGTAAGGCTGGAATGGCAAGAACAGGGTTGATGATTTCCAGTCTTCTATTATTCTTAAAGTTCTTTCCAACTGCTGAGGAGTCAATGGATTACTATAATCAGAAACGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTAGGTATGTCAAATATTTTGAACGTGTCTTGACTTACTTCAATGGCGAAAACCCACCTGCCCGTAGGTGCATGCTTAGGGGATTTCGGCTTCACAGGTGCCCTTACTGGATCAGGCCCTCTATAACTGTCTCAGATCATAGTGGTGTGCTGTTCTCTACCAAAAAGCATCCAAGGACCAAGGATCTTTTGCCAGAAGATTTCTGGTTCAGTGCTCCAAAGAAGGGAGTAATGGTCTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAATTGGCTGGGGACTTCAAAATTCATTTTCATGATCGCCAAGGAGACTTCTACTGTTGGTTGAACACAACTATGACAGAAAATAGAAAAGTATTGAACACCAGTGATCTTGATGGCTTTGACAAGAGGAAATTGCCTTCTCCAGGATTCCTCGTTGAGGTTGTGCTGGTTGATTATAATGGTAATGTTGTGGCTTCCGAACCCGAGGCCACTGGAAAAAGATCAGATGAGAGTTCAAGTGATAGTGCCACCCCAGTTGAAGCAAGCATACCTGTGCAGAATACAGACAAAGAGTCAGGGAGTCGAGATAAAGATGATGTGTTTTCAGATGGTGAGTCGGAGCATTCTGCTTCTTCAAGAAGCAAGCAAGCAAAACCAGCTTCTGAACCAGTTAAAACGGTTAACAAGGCTACCAGTGGATCTGAAACCAACAAAATTTCAAATCAAGTTGCAAATCTAACACATGCAACTGAACAAGTTTCTTTGGAAAGTGCAAGCTCGAAACCAGTTCATGCTGGTCAACCAAAAAGTGATAATGAAAGAACTGTGTCTGGTATTGAGATGGCCAGCTCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCATCTGTTTTTACATTTGGAGATGATGAAGACTACGAAAGTGATTAA 1854 0.4283 MESVPGDVSNLPPSKDPSPSPPVKETDGQASSAPVAFGQDSSGHVAPSKPSSTGASSWAKNLNISQPSGSQDDPSTGNAGKSTFARLTSNLGLRLSPKSPPADDSSNETPAQSNIFGSITRGLVDTSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPLQLVISFCHSAYSWLKLDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTSDLDGFDKRKLPSPGFLVEVVLVDYNGNVVASEPEATGKRSDESSSDSATPVEASIPVQNTDKESGSRDKDDVFSDGESEHSASSRSKQAKPASEPVKTVNKATSGSETNKISNQVANLTHATEQVSLESASSKPVHAGQPKSDNERTVSGIEMASSESEFKAMAADASVFTFGDDEDYESD 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03548 617 ProSitePatterns Tyrosine specific protein phosphatases active site. 263 273 IPR016130 GO:0016311|GO:0016791
Arst9g03548 617 MobiDBLite consensus disorder prediction 521 583 - -
Arst9g03548 617 MobiDBLite consensus disorder prediction 468 583 - -
Arst9g03548 617 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 328 IPR029021 -
Arst9g03548 617 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 132 329 - -
Arst9g03548 617 SMART PTEN_C2_2 331 459 IPR014020 -
Arst9g03548 617 Gene3D Protein tyrosine phosphatase superfamily 132 329 IPR029021 -
Arst9g03548 617 MobiDBLite consensus disorder prediction 498 520 - -
Arst9g03548 617 MobiDBLite consensus disorder prediction 1 114 - -
Arst9g03548 617 MobiDBLite consensus disorder prediction 24 114 - -
Arst9g03548 617 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 261 300 IPR000387 GO:0016311|GO:0016791
Arst9g03548 617 ProSiteProfiles C2 tensin-type domain profile. 333 460 IPR014020 -
Arst9g03548 617 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 124 576 - -
Arst9g03548 617 CDD PTP_PTEN 157 321 IPR045101 GO:0016791
Arst9g03548 617 ProSiteProfiles Phosphatase tensin-type domain profile. 147 326 IPR029023 -
Arst9g03548 617 MobiDBLite consensus disorder prediction 478 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03548 Arst-Chr9 111926882 111931953 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03548 38 617 Protein tyrosine phosphatase (PTP) family AT3G19420 69.477 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03548 K01110 - gmx:100784003 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03548 9 111926882 111931953 Arst9g03548 9 111926882 111931953 ECH
Arst5g00817 5 7235751 7240807 Arst9g03548 9 111926882 111931953 PCT