Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03483 ATGCAGGGCGAACTAGAAGAATTTACAAGCCCCAACAGAAGTGCCTCTAGAAAGATGCAAACACCGGATGCTGGAACAGAACAATGTCATTTGTCAGAGAAAACATCTCAGGTGGGTTCCGAATGTTTAGACAACAAGCAAGGTGTGCCTGGCAATGTGTTAGGCAGTTCTCTTATTGATGACCAAGCTTCTGAGAAAATGGCCAAGAGTTCTGAGTGTTTGGACAACAAGCAGAGCATGCCTAGTGATGTGTTAACAAGCTCCATGATTGATGAAAACTCAAACCGTGTGGCCGAGAATCCTGAGCTTTTGGACGACAAGCAAAGCATGCATAGTGATGTGTTAACCGCTTCCGTGATTGATGAAAAATCAAACCAAGTTTCTGAAAAAATGACTGATGGTACGCAGTGTTTGGGCAACAAGAAAAACTTGCAAGGTGAAGTGTTAACCAATTGTGTAATTGATGAAAAATCAAATGAGGTCTCTGAAAAATTGATCGAGGGTCCTGAGCATTTGGCCAGCAGGCAAAGCATGCATAGCGATGATGCATTGACCAATTCTGTGATTGATGAAAAATCAAACCAAGTTTCTGATAAAATGTTTGAGTGTCTTGAGCATTTGGCCAACAAGCAAAGCATGCATGGTGCTGTGTTAACCAAATCTGTGATTGACGAAAAGTTAAATCAAGTTTCTGACAAAATGACTGAGAGTCCAGAGTGTTTGGACAACAGGCAAAGCCTGCATGGTGATGTGCTAACCAATTCTGTGATTGATGAAAAAACAAACCAAGTATATGAAAAAATGACTGAGAGTCCTGAGCGTTTGGACAAGAAGCAAGGCATGCATGGCGATGTGTTAATCAATTCGGTGATTCGTGAAAACTCAAACCATGTTTCTCGCAAAATGACTGAGAGTTCTCAGTGTTTGGACAACAAGCAAAGTGTAATTGACGAGGTGTTAACCAGTCATGTGATTGATGAAAAATCGAACCAAGTTTCAGACAAAACGACAGAGAGTTCTCAGTGTTTACACAATACACAAAGCATGCCAAGCAATGTGTTAACCAGCTCTGTTATTGATGAAAACTCAAACCAAGGTTCTGGAAAAATTATTAGGGGTGCTGTTATTGCACTGCCTGCACAACGCCAGCGTGATTTGAAAAAGAGTTGTCAAACTGCAGAAGGTTCATGCTCTCATCGGAGTACCTCAGAACAAGACCCCTCTCATTTGTCTAATGACAAATCAGAGATCAAATGTGAGCCTTTTTCTCAGAATGGCCAAAATGTGTCCGTGGAAATAAATAATCCTGTAACTGGCTCTCTTGTTGAGAACCAAATGCTATCTGTTCCAACACAAGTGAACACCACTTCTGCAAATGGACTACAGGATCCAGCTCCAGCATCTGTAGATGTGAAAAATACTGGTTTGAAATGTTCAAAAAGAAACTCTACAGCCACAACATCTATGCAGTTGAGCTGCAAGGGTAAAAAAAGCTCAAAATTATTAAAGAAGAAGTATATGCTAAGGTCATTAGGAAGCAGTGATAGAGCTTTGCGATCAAGGACACGCGAAAAACCTAAACCACCTGAGTCAAATAGCAATTTGGTTGATGCTAATAATGATGGCGTGAAGAATAAAAGGGGGAAGAAGAAGAACAAAAAGAGAGACGGGGAAGGAGTTATTGATGAATTTTCTAGAATAAGAGCTCGCTTAAGATATTTATTGAAACGAGTTAGCTATGAGCAGAACTTGATTGATGCTTATTCTAGTGAGGGCTGGAAAGGATACAGTTTGGAAAAGTTAAAGCCTGAAAAGGAGCTTCAACGGGCTAAGACTGAAATACTTCGACGTAAATTGAAAATGAGGGATCTCTTTCGATATTTGGATTCATTGTGTGCTGAAGGAAGGCTTCCTGAATCTGTGTTTGATTCTGAAGGAGAGATTGACAGTGAGGATATATTCTGTGCAAAATGTAGTTCCAAAGAGTTGAGCACAAACAATGATATAATTCTCTGTGACGGTGCTTGTGAACGTGGATTTCACCAGCTTTGTGTGGATCCTCCTTTGTTAACTGAAAACATTCCACCTGGCGATGAGGGTTGGCTATGCCCGGGATGTGATTGCAAAGATGACTGTATTGAACTTGTTAATGACTCCTTAGGAACACGTCTCTCTCTTGAGGATAGCTGGGAGAGGGTTTTTCCAGAAGCAGCTGCAGTTGATGCATTCAATGTGGATCACAACTCAGGACTTCCTTCTGATGATTCTGATGATGATGATTATGATCCTGATGTTAAAGAAGATGTGGAGGCTGAAGGGGGTGAATCAAGTTCTGATGAATCTGAGTATGCTTCTGCTTCTGAGAAATTGGAGGATTCAGGCCATGAGGATCAGTACATGGGCCTTCCTTCTGAAGATTCTGAGGATGATGATTATAATCCTGATGCTCCAGATCAAGACATGAAAGTTGCAGAGGAAAGTTCGAGCTCTGATTTCACATCTGATTCTGAGGATCTTGCTGCTACAATTAATGATAATATGCCCCCAGGACACGGTGAAGATATCACATCTGCATCATTGGATGATGCAAAGAAGTTTAAAGGATCCAGCAAAACAAGTAAAGTCGGTAAGAAGCCATCTATAACTGATGAATTGTCATCTTTACTAGAGGCAGATCCTGGCCAAGAGAGTTACACTCCTGTTTCGGGGAAAAGAAATGTGGAAAGGTTGGACTACAAAAAGCTGTATGATGTAAGTTCTAGTGGATGCATAGAGTCAAAGTTATTTCTTGTCACATTCTTTACTACCCCAACTAGGAAGAAGAATGTCACTGGTAAATTGACTCCAATGTCACCAAATAGAAAAGCCTCAAATAATTCTACACATACTCTGAGAAGTGACGGTAAAGCTGAAAAAACAAATAACTCAGCTGCTAAATCACTTGAAGGCTCTGGAAAATCAGGTTCCGGGGAGAAAAAACTAAGATCTTCAACATACAACAGACTTGGAGATGTTGCAATTGAGAGACTTTACAAATCTTTCAAAGAGAATCAGTATCCAGATCGGACCACAAAAGAAAGCTTGGCACAAGAAACAGGACTCACACTTCAGCAGGTAAGTAAATGGTTTGACAACACCAGATGGAGCTTTAGGCATTCATCCCATAAGGAACCCAGGACAGGTGAAAATGCTTTGGCACAGACCACTGATAACATATCTGAAAATGAGGTGGCACCTGCTGGAGAGAACAGGGACAGTGAATTATTCCCCCAAGATGTCACCGGAGAAAACTCAAAAACCCCAAGCTCTAAAAAGAGGAAGGGTATGTCTGAACCCCTGGCATCTGAGTCTCCTCAGAATGCTGATAAAGCATCAAGTCATAAAATGAAGACAAGGAAAAGAAAATGA 3408 0.4099 MQGELEEFTSPNRSASRKMQTPDAGTEQCHLSEKTSQVGSECLDNKQGVPGNVLGSSLIDDQASEKMAKSSECLDNKQSMPSDVLTSSMIDENSNRVAENPELLDDKQSMHSDVLTASVIDEKSNQVSEKMTDGTQCLGNKKNLQGEVLTNCVIDEKSNEVSEKLIEGPEHLASRQSMHSDDALTNSVIDEKSNQVSDKMFECLEHLANKQSMHGAVLTKSVIDEKLNQVSDKMTESPECLDNRQSLHGDVLTNSVIDEKTNQVYEKMTESPERLDKKQGMHGDVLINSVIRENSNHVSRKMTESSQCLDNKQSVIDEVLTSHVIDEKSNQVSDKTTESSQCLHNTQSMPSNVLTSSVIDENSNQGSGKIIRGAVIALPAQRQRDLKKSCQTAEGSCSHRSTSEQDPSHLSNDKSEIKCEPFSQNGQNVSVEINNPVTGSLVENQMLSVPTQVNTTSANGLQDPAPASVDVKNTGLKCSKRNSTATTSMQLSCKGKKSSKLLKKKYMLRSLGSSDRALRSRTREKPKPPESNSNLVDANNDGVKNKRGKKKNKKRDGEGVIDEFSRIRARLRYLLKRVSYEQNLIDAYSSEGWKGYSLEKLKPEKELQRAKTEILRRKLKMRDLFRYLDSLCAEGRLPESVFDSEGEIDSEDIFCAKCSSKELSTNNDIILCDGACERGFHQLCVDPPLLTENIPPGDEGWLCPGCDCKDDCIELVNDSLGTRLSLEDSWERVFPEAAAVDAFNVDHNSGLPSDDSDDDDYDPDVKEDVEAEGGESSSDESEYASASEKLEDSGHEDQYMGLPSEDSEDDDYNPDAPDQDMKVAEESSSSDFTSDSEDLAATINDNMPPGHGEDITSASLDDAKKFKGSSKTSKVGKKPSITDELSSLLEADPGQESYTPVSGKRNVERLDYKKLYDVSSSGCIESKLFLVTFFTTPTRKKNVTGKLTPMSPNRKASNNSTHTLRSDGKAEKTNNSAAKSLEGSGKSGSGEKKLRSSTYNRLGDVAIERLYKSFKENQYPDRTTKESLAQETGLTLQQVSKWFDNTRWSFRHSSHKEPRTGENALAQTTDNISENEVAPAGENRDSELFPQDVTGENSKTPSSKKRKGMSEPLASESPQNADKASSHKMKTRKRK 1135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03483 1135 MobiDBLite consensus disorder prediction 1052 1135 - -
Arst9g03483 1135 ProSiteProfiles 'Homeobox' domain profile. 993 1053 IPR001356 GO:0003677
Arst9g03483 1135 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 647 703 IPR013083 -
Arst9g03483 1135 Pfam Homeodomain 1006 1049 IPR001356 GO:0003677
Arst9g03483 1135 MobiDBLite consensus disorder prediction 1 43 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 334 348 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 941 983 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 328 348 - -
Arst9g03483 1135 FunFam Homeobox protein HAT3.1 635 713 - -
Arst9g03483 1135 SMART PHD_3 654 707 IPR001965 -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 753 777 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 387 416 - -
Arst9g03483 1135 Pfam PHD-finger 654 709 IPR019787 -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 782 802 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 512 558 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 941 996 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 516 530 - -
Arst9g03483 1135 CDD homeodomain 1001 1054 IPR001356 GO:0003677
Arst9g03483 1135 ProSiteProfiles Zinc finger PHD-type profile. 652 709 IPR019787 -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 745 857 - -
Arst9g03483 1135 Gene3D - 996 1064 - -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 390 405 - -
Arst9g03483 1135 SMART HOX_1 995 1057 IPR001356 GO:0003677
Arst9g03483 1135 MobiDBLite consensus disorder prediction 1060 1076 - -
Arst9g03483 1135 SUPERFAMILY FYVE/PHD zinc finger 644 712 IPR011011 -
Arst9g03483 1135 SUPERFAMILY Homeodomain-like 999 1055 IPR009057 -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 1 50 - -
Arst9g03483 1135 ProSitePatterns Zinc finger PHD-type signature. 655 706 IPR019786 -
Arst9g03483 1135 MobiDBLite consensus disorder prediction 826 841 - -
Arst9g03483 1135 CDD PHD_PRHA_like 654 706 IPR045876 -
Arst9g03483 1135 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 391 1130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03483 Arst-Chr9 111548724 111555251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03483 511 1050 Homeobox Transcription Factor Family AT3G19510 46.140 1.01e-126 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Arst9g03483 PHD 2.7e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03483 - - aip:107617775 1801.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03483 9 111548724 111555251 Arst9g03483 9 111548724 111555251 ECH