Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03469 ATGCTACGATTATGCTATAGCCCTTTCGATTGTTGCTTCCGGCGACGCGTCGGCGGCTCTGATAGCCTTCTCTGGCACACTGACCTCAAGCCTCACTTCTCCGGTGACTTCTCCATCGCCGTCGCTCAGGCCAATAACAGCCTCGAAGATCAGAGCCAAGTCTTTACCTCCCCCTCCGCCACCTACATAGGCGTCTACGACGGCCACGGCGGCCCCGAGGCTTCCAGATTCGTCAACAAGCGTCTCTTACCCTATTTGCACAAATTCGTCTCTGAACAAGGGGGATTGTCAGTGGATGTCATAAAGAAGGCGTTCAGTGCGACGGAGGAGGAGTTCTTGCATTTGGTGAAGCTGTCTTTACCAGTTAGTCCCCAGATTGCTTCAGTGGGATCATGCTGCCTTCTTGGCGCAATTTCTAATAATGTGTTGTATGTCGCTAACCTTGGAGACTCGAGAGCTGTTCTTGGCCGGAGGGATACAGAGAGCAAGAATTCTCCTGTGGTGGCACTGCGGTTGTCCACGGATCATAATGTAGCTGATGAAGAGGTGAGGCGAGAAGTTGAAGCCCTCCACCCTGATGATTCACATATTGTGGTCTATACTCGTGGAGTTTGGAGGATTAAGGGCATTATACAGGTGTCAAGATCAATTGGTGATGTCTATTTAAAGAGACCTGATTTCTTCAGAGACCCAGTTTTTCAGCAATTTGCAACTCCTATTCCCTTGAAGCGTCCTGTAATGACAGCTGAACCATCGGTCATAATTAGGGAGCTTGAAACAGAAGATCTATTTTTGATATTTGCATCAGACGGCCTATGGGAACAATTAAGTGATGAAGCAGCAGTTGAGATTGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTGAGAGCTGCACTTCAGGAAGCCGCAAAGAAGAGAGAGATGAGATATGATGACATAAAGAAAATTGACAAAGGAATCAGACGACACTTCCATGATGATATAACTGTCATTGTAATCTATCTTGATCACCATGACAGCTCCTCCTCTAATGGAAGGTTTAAGCAAAGTGCTGTTGGCTGCACAACTGCCCCTATTGATATTTTTTCCCTAAATGCGGATGAAGCAGAGAAGAGTATGCTTGGTGCGATGGCCTAA 1146 0.4695 MLRLCYSPFDCCFRRRVGGSDSLLWHTDLKPHFSGDFSIAVAQANNSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLLPYLHKFVSEQGGLSVDVIKKAFSATEEEFLHLVKLSLPVSPQIASVGSCCLLGAISNNVLYVANLGDSRAVLGRRDTESKNSPVVALRLSTDHNVADEEVRREVEALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKRPDFFRDPVFQQFATPIPLKRPVMTAEPSVIIRELETEDLFLIFASDGLWEQLSDEAAVEIVFKYPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVIVIYLDHHDSSSSNGRFKQSAVGCTTAPIDIFSLNADEAEKSMLGAMA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03469 381 ProSiteProfiles PPM-type phosphatase domain profile. 36 338 IPR001932 -
Arst9g03469 381 SMART PP2C_4 30 336 IPR001932 -
Arst9g03469 381 PANTHER PROTEIN PHOSPHATASE 35 339 IPR015655 GO:0004722|GO:0006470
Arst9g03469 381 SUPERFAMILY PP2C-like 43 340 IPR036457 -
Arst9g03469 381 FunFam Probable protein phosphatase 2C 42 27 346 - -
Arst9g03469 381 CDD PP2Cc 41 338 IPR001932 -
Arst9g03469 381 Gene3D - 30 347 IPR036457 -
Arst9g03469 381 Pfam Protein phosphatase 2C 57 307 IPR001932 -
Arst9g03469 381 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03469 Arst-Chr9 111462094 111464400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03469 17 348 PP2C-type Phosphatase Gene Family AT3G51370 56.765 3.48e-144 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03469 K01102 - gmx:100812137 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03469 9 111462094 111464400 Arst9g03469 9 111462094 111464400 ECH
Arst5g00792 5 6847796 6850521 Arst9g03469 9 111462094 111464400 PCT