Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Arst9g03468 | ATGACGAGCGCTTCGGAGCTATTCCACAGCAGGAGGCATCGTTTGGGACGATACAATAACAATCTAGGGCTTGACTCCGACCATGTTCCCGACCTCCACCATCCTCGCCGCCTTTCTCGCCGCCTCCCTCACTCTCCCTCTTCCTCCGAGCGTGCAGCAGCAGCTGATAGATTCGAGAGGAGGTATCGGCGGTCGCTGTTGAATGCGGAAAGCGTGAGAGATGCGTTTGCTCCTCCCTCCGATAGACTTCCTGTTGGTGTCTTACTTGCACGCGCCAGGCTCGTTGAGAGACTCAGAGGAGACCCTCTCTCGCCTAACAGGCACTCAATAGGCAGGGATCAAGAAAGTGATGATGTTGTTGTTTCTGACTTGACTTCTCAAATGGGAAGGTCCCATCTATTGCAAGAGAAACCACCTGGACTGTCTCAGGAAGCCCTAGAGTCTTTACATGTTGAAGTTTTTAGCAGCAGGGATACAGGTGAGGATTGTAGCATATGCTTGGAATCTTTTGTGGATGGGGATCAGCTCATATGTTTGCCATGTCACCATAGATTTCACTTTGCTTGTTTGGATCCTTGGGTTCGCTGTTGCGGAGACTGTCCCTACTGTCGACGACATATACTTGTAAATAAATAA | 636 | 0.5031 | MTSASELFHSRRHRLGRYNNNLGLDSDHVPDLHHPRRLSRRLPHSPSSSERAAAADRFERRYRRSLLNAESVRDAFAPPSDRLPVGVLLARARLVERLRGDPLSPNRHSIGRDQESDDVVVSDLTSQMGRSHLLQEKPPGLSQEALESLHVEVFSSRDTGEDCSICLESFVDGDQLICLPCHHRFHFACLDPWVRCCGDCPYCRRHILVNK | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Arst9g03468 | 211 | Pfam | Ring finger domain | 162 | 204 | IPR001841 | - | |
Arst9g03468 | 211 | ProSiteProfiles | Zinc finger RING-type profile. | 163 | 204 | IPR001841 | - | |
Arst9g03468 | 211 | MobiDBLite | consensus disorder prediction | 19 | 56 | - | - | |
Arst9g03468 | 211 | SMART | ring_2 | 163 | 203 | IPR001841 | - | |
Arst9g03468 | 211 | SUPERFAMILY | RING/U-box | 150 | 209 | - | - | |
Arst9g03468 | 211 | PANTHER | SI:CH211-59O9.10 | 40 | 209 | - | - | |
Arst9g03468 | 211 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 127 | 208 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Arst9g03468 | Arst-Chr9 | 111459739 | 111460917 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Arst9g03468 | 1 | 207 | C3H Transcription Factor Family | AT1G49850 | 34.496 | 6.52e-31 | 112 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Arst9g03468 | - | - | aip:107619305 | 363.229 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Arst9g03468 | 9 | 111459739 | 111460917 | Arst9g03468 | 9 | 111459739 | 111460917 | ECH |