Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03468 ATGACGAGCGCTTCGGAGCTATTCCACAGCAGGAGGCATCGTTTGGGACGATACAATAACAATCTAGGGCTTGACTCCGACCATGTTCCCGACCTCCACCATCCTCGCCGCCTTTCTCGCCGCCTCCCTCACTCTCCCTCTTCCTCCGAGCGTGCAGCAGCAGCTGATAGATTCGAGAGGAGGTATCGGCGGTCGCTGTTGAATGCGGAAAGCGTGAGAGATGCGTTTGCTCCTCCCTCCGATAGACTTCCTGTTGGTGTCTTACTTGCACGCGCCAGGCTCGTTGAGAGACTCAGAGGAGACCCTCTCTCGCCTAACAGGCACTCAATAGGCAGGGATCAAGAAAGTGATGATGTTGTTGTTTCTGACTTGACTTCTCAAATGGGAAGGTCCCATCTATTGCAAGAGAAACCACCTGGACTGTCTCAGGAAGCCCTAGAGTCTTTACATGTTGAAGTTTTTAGCAGCAGGGATACAGGTGAGGATTGTAGCATATGCTTGGAATCTTTTGTGGATGGGGATCAGCTCATATGTTTGCCATGTCACCATAGATTTCACTTTGCTTGTTTGGATCCTTGGGTTCGCTGTTGCGGAGACTGTCCCTACTGTCGACGACATATACTTGTAAATAAATAA 636 0.5031 MTSASELFHSRRHRLGRYNNNLGLDSDHVPDLHHPRRLSRRLPHSPSSSERAAAADRFERRYRRSLLNAESVRDAFAPPSDRLPVGVLLARARLVERLRGDPLSPNRHSIGRDQESDDVVVSDLTSQMGRSHLLQEKPPGLSQEALESLHVEVFSSRDTGEDCSICLESFVDGDQLICLPCHHRFHFACLDPWVRCCGDCPYCRRHILVNK 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03468 211 Pfam Ring finger domain 162 204 IPR001841 -
Arst9g03468 211 ProSiteProfiles Zinc finger RING-type profile. 163 204 IPR001841 -
Arst9g03468 211 MobiDBLite consensus disorder prediction 19 56 - -
Arst9g03468 211 SMART ring_2 163 203 IPR001841 -
Arst9g03468 211 SUPERFAMILY RING/U-box 150 209 - -
Arst9g03468 211 PANTHER SI:CH211-59O9.10 40 209 - -
Arst9g03468 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 127 208 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03468 Arst-Chr9 111459739 111460917 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03468 1 207 C3H Transcription Factor Family AT1G49850 34.496 6.52e-31 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03468 - - aip:107619305 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03468 9 111459739 111460917 Arst9g03468 9 111459739 111460917 ECH