Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03460 ATGGTTGATGCTTTGAATGAAGTGCAACGCAGCGGCAATGCATTTGTTATTCCTGCTAAGAGGGATGCTGTATTGTTTGAAGGAGACAAAGATTTAGAGCCACACAATGGGATTGAATTTGAATCTCATGAAGCAGCATATTCATTTTATCAGGAATATGCCAAATCAATGGGATTCACAACTTCGATCAAGAATAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAATTTGCGTGCTCTCGGTATGGCGTTACACCTGAGTCTGACAGCGGGAGCAGTCGAAGACCCAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAAAGAAGGTCAGAAGGGAAGTGGATCATTCATGAATTTATAAAGGAACACAACCATGAACTCTTACCGGCTTTGGCATATCATTTTCGTATTCATAGGAATGTCAAGTTAGCTGAAAAGAATAATATTGATATTTTGCATGCTGTTAGTGAACGAACCAGAAAAATGTATGTTGAGATGTCTAGGCAGTCTGGTGGGTGTCGAAATACTGGATCCCTCTTGGGGGACACAAATGATCAGTTTGACAGAGGCCGACAGCTGGCTTTGGATGAGGGAGATGGCCATTTCATATTGGAGTATTTTAAGCGCATCCAAAAGGAGAACCCCTATTTCTTCTATGCTATCGATTTAAATGAAGAGCAACGTTTAAGGAATCTATTCTGGGTTGATGCAAAAAGTAGGAACGATTATCTTAGCTTTAATGATGCAGTCTCATTTGATATCACTTACATCAAAAGCAATGATAAGTTACCATTTGCTCCTTTCATTGGGGTGAATCATCACTCTCAACCTATATTGCTTGGGTGTGCTTTGCTTGCAGATGAGACCAAGCCAACATTTGTCTGGTTAATGAAGACATGGCTTAGAGCGATGGGAGGGCAAGCTCCCAAAATTATAATTACTGATCAAGACAAAGCCTTGAAGACAGCAATTGAAGAAGTCTTCCCAAATGCGAGACATTGCTTTGCCCTTTGGCACATACTTGAAAGGATACCTGAAAATCTATCTTCTGTGATCAAGCAGTATAAGAACTTCTTGCGAAAGTTAAACAAGTGCATTTTTAAGTCATGGACTGATGAAGAGTTTGACATGAGATGGTGGAAAATGGTCACTAGATTTGAACTTCAAGATGATCTATGGTGTCAATCACTGTATGAAGATCGGAAAAAGTGGGTGCCAACTTATATGGGGGATACTTTTTTAGCTGGAATGTCTACACCTCAGCGTTCTGAAAGTATGAACTCTTTCTTTGACAAATACATACACAAGAAAATCACCCTTAAAGAGTTTGTGAAACAATATGGGTTAATCCTTCAGAATAGGTATGAAGAGGAGGCAATTGCAGATTTTGATACATTGCACAAGCAGCCAGCACTCAGATCTCCTTCACCTTGGGAAAAACAAATGTCAACGGTTTATACACATGCAATATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAGAACAGAGCCTGGTGATGGACCAATTACAAAGTTTATAGTTCAAGATTATGAGAAAGATGAAGAGTTTTTGGTTACATGGAATGAATTGAGCTCAGATGTCTCTTGTTTCTGTCGATTGTTTGAATATAAAGGTATCCTTTGCAGGCATGCGTTAAGCGTTCTCCAACGTTGTGGTTGTTCAAGTGTTCCACCTCATTATGTTATGAAAAGATGGACGAAAGATGCCAAAAGTAGGGAACCCATGGCAGATAGGACTCAGAAAGTACAAACAAGGGTGCAGCGTTATAATGATTTGTGTAAACGTGCTATTGATTTGAGTGAAGAAGGATCACTGTCTGAAGAGAGCTATAGTGTTGTTTTCCGTACACTTGTTGATACCCTGAAGAACTGTGTATATGTAAATAATTCTAACAACAATGGTGCAGAAACTAGCAACAATTCTTTTTCCGTTCATGAAGCAGAAGAAAATCAGGGCACCCTTCAATTGAAAGCAAGTAAGAAGAGGGGCACTGCTAGGAAAAGAAAGGTGCAGTCAGATCAGGAAGTTATGCTTGTTGACACACAAGATAGCCTGCAGCAAATGGATAATCTAAGCTCAGACACAATAACACTCAATGGATACTATGGTACCCAGCAGAGCATGCAAGGACTGGTACGGTTGAACTTAATGGAGCCGCCTCATGATGGTTACTATGTCAATCAACAGAATATGCAAGGCTTGGGTCCCTTGAATTCTATGGCTCCTAGCCATGATGGGTTTTTTGGAACTCAGCAAAGCATTCATGGGCTGGGAGGGCAACTGGAATTCCGCCCTGCTACTTCTTTTGGATATAGCCTTCAGGATGAGCCTGATCCTCTGTTCCATGGCAGTAGTTCTAGAAATACTTAG 2427 0.4042 MVDALNEVQRSGNAFVIPAKRDAVLFEGDKDLEPHNGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRRSEGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSRQSGGCRNTGSLLGDTNDQFDRGRQLALDEGDGHFILEYFKRIQKENPYFFYAIDLNEEQRLRNLFWVDAKSRNDYLSFNDAVSFDITYIKSNDKLPFAPFIGVNHHSQPILLGCALLADETKPTFVWLMKTWLRAMGGQAPKIIITDQDKALKTAIEEVFPNARHCFALWHILERIPENLSSVIKQYKNFLRKLNKCIFKSWTDEEFDMRWWKMVTRFELQDDLWCQSLYEDRKKWVPTYMGDTFLAGMSTPQRSESMNSFFDKYIHKKITLKEFVKQYGLILQNRYEEEAIADFDTLHKQPALRSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSRTEPGDGPITKFIVQDYEKDEEFLVTWNELSSDVSCFCRLFEYKGILCRHALSVLQRCGCSSVPPHYVMKRWTKDAKSREPMADRTQKVQTRVQRYNDLCKRAIDLSEEGSLSEESYSVVFRTLVDTLKNCVYVNNSNNNGAETSNNSFSVHEAEENQGTLQLKASKKRGTARKRKVQSDQEVMLVDTQDSLQQMDNLSSDTITLNGYYGTQQSMQGLVRLNLMEPPHDGYYVNQQNMQGLGPLNSMAPSHDGFFGTQQSIHGLGGQLEFRPATSFGYSLQDEPDPLFHGSSSRNT 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03460 808 Pfam MULE transposase domain 256 348 IPR018289 -
Arst9g03460 808 ProSiteProfiles Zinc finger SWIM-type profile. 535 571 IPR007527 GO:0008270
Arst9g03460 808 Pfam SWIM zinc finger 537 570 IPR007527 GO:0008270
Arst9g03460 808 SMART 26again6 546 573 IPR006564 GO:0008270
Arst9g03460 808 Pfam FAR1 DNA-binding domain 48 135 IPR004330 -
Arst9g03460 808 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 643 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03460 Arst-Chr9 111424160 111428747 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Arst9g03460 MULE 6.8e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03460 - - gmx:100805377 1412.13