Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03453 ATGAGCTGCAATGGATGCCGTGTGCTACGAAAAGGGTGCAGCGAAGAGTGCATGCTACGACATTGCCTGGTGTGGATACAGGACAATCCACGAGCACAGGGTTACGCCACCCTCTTCGTCGCCAAGTTCTTCGGCCGCGCCAACCTCATGTCTTTCCTTTCCTCCGTTCCCACCAACCACAGATCCGCATTGTTTCAGTCACTTCTATATGAGGCAGTGGGTCGTACCATAAATCCGGTGAGTGGGGCAGTGGGGCTGCTCTCGACAGGCAACTGGCATCTCTGCCAGTCCGCGGTGGACAAAGTGCTGCGAGGGGGCGGCGCCGCCTTGACGGAAAGTAGTGATCATTTGAAAGAAGCAGAATCAGAAGAGAGAATTGAATCAAAGAAGCAACCACCCAGCAACACAACAACTACTCATCATTGGCCTTCTCAAACGACTGATACCAAGCTGCTTACGCTTTTCTTATGA 471 0.5265 MSCNGCRVLRKGCSEECMLRHCLVWIQDNPRAQGYATLFVAKFFGRANLMSFLSSVPTNHRSALFQSLLYEAVGRTINPVSGAVGLLSTGNWHLCQSAVDKVLRGGGAALTESSDHLKEAESEERIESKKQPPSNTTTTHHWPSQTTDTKLLTLFL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03453 156 MobiDBLite consensus disorder prediction 113 148 - -
Arst9g03453 156 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Arst9g03453 156 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 129 - -
Arst9g03453 156 MobiDBLite consensus disorder prediction 131 148 - -
Arst9g03453 156 ProSiteProfiles LOB domain profile. 1 108 IPR004883 -
Arst9g03453 156 MobiDBLite consensus disorder prediction 114 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03453 Arst-Chr9 111386359 111387028 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03453 1 106 AS2 family AT3G49940 73.585 1.25e-53 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Arst9g03453 LOB 1.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03453 - - gmx:100816269 193.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03453 9 111386359 111387028 Arst9g03453 9 111386359 111387028 ECH
Arst5g00771 5 6669201 6670620 Arst9g03453 9 111386359 111387028 PCT