Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03442 ATGGAGCCTGGTGAGGAAATTTATGCAGAATGGAGTTCCCTTAGTGGATCATACACAGCTGAGGAAGCTGATTTCATGAACCAATTTCTTAGCAACTGCTCACACACACAACAGCTACATGCAAATTTGAATGCAGGAATTCCATCTGCATTATGGTATGGTCATGCAGACATCAATAGCAGTTCATTTTATGCTGCAGATGCTTCTAACAATATGTTTCCAATTATAGATAGTGACAACTTGAATGATCCATTAACCAACTTGGTGGATCCCTCATTAAGCACATATACTGATAAAGAGTTAGGTGTAGATGTTATTGCTGATAAGAATGTACCAAGTCAACCTGTTTCTGAACCAGCCCAAGAGAATATAACCAGCAAGCTGGAGAAGCCAAGAAAAAGATCTCGGAGTTCAAATGAGATACTAAAGAACAAGAAAAATGTTAAGACTACAAAGAAACCAAAATCTGCTTCCATTAGCAACATTAAAGAAGAAGATAGATGTCCTGGTCAGGGGGAAAACTTGAGCTGTTCCTGCTCAGAAGATGACTTGGATACGTGTCATGAGCTAAATGAAGGAGAGTCTTCGAGCTTGAGCCTGAAATATTCTAAAGGTCTTCAGTTAAATGGCAAATCTAGATCTAGTAGAGGTTCTGCTACTGATCCACAGAGCATCTATGCAAGAAGAAGAAGAGAAAGAATAAATGAAAGGTTGAGAATCTTACAAAACTTAGTGCCTAATGGAACCAAGGTGGATATCAGCACAATGCTCGAGGAGGCTGTCCAATATGTGAAATTTTTACAGCTCCAAATTAAGCTCTTGAGCTCTGATGATCTCTGGATGTACGCTCCAATTGCTTACAATGGAATGAACATTGGACTAGACTTCAATATTACCACACCGAAACAAAACAATAATAGCAGATATATAGCATAG 936 0.3878 MEPGEEIYAEWSSLSGSYTAEEADFMNQFLSNCSHTQQLHANLNAGIPSALWYGHADINSSSFYAADASNNMFPIIDSDNLNDPLTNLVDPSLSTYTDKELGVDVIADKNVPSQPVSEPAQENITSKLEKPRKRSRSSNEILKNKKNVKTTKKPKSASISNIKEEDRCPGQGENLSCSCSEDDLDTCHELNEGESSSLSLKYSKGLQLNGKSRSSRGSATDPQSIYARRRRERINERLRILQNLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDFNITTPKQNNNSRYIA 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03442 311 MobiDBLite consensus disorder prediction 125 147 - -
Arst9g03442 311 SMART finulus 224 273 IPR011598 GO:0046983
Arst9g03442 311 MobiDBLite consensus disorder prediction 108 174 - -
Arst9g03442 311 Pfam Helix-loop-helix DNA-binding domain 228 268 IPR011598 GO:0046983
Arst9g03442 311 Gene3D - 216 275 IPR036638 GO:0046983
Arst9g03442 311 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 291 - -
Arst9g03442 311 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 216 284 IPR036638 GO:0046983
Arst9g03442 311 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 218 267 IPR011598 GO:0046983
Arst9g03442 311 FunFam Basic helix-loop-helix transcription factor 219 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03442 Arst-Chr9 111334508 111335962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03442 6 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G14760 39.884 3.72e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Arst9g03442 HLH 6.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03442 - - ahf:112711907 510.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03442 9 111334508 111335962 Arst9g03442 9 111334508 111335962 ECH