Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03428 ATGTCTTCTTCGTCTCCAGACCACTCCACTACCTCCGCTAGCATGCTGTGCGTCGAAGACGCCAGCGAAGCAATCTCCGACCACCCCTCTCCGCCCTCACTGGCAGCAGTCTGGCAGCCCTACGACGATGATTCCGACATCAGCGAACTCATCGACGCAGAGGCGCGGCACATGGCGTCGGCGGATTACCTCCGGCGGTGCGGCGATGGTTCGGTGGACGTGAGCGCACGGTTGGACGCCATCAACTGGATGTTAAAGGTGCAGGCATTCTATGAGTTCCATCCAGTAACGGCCTTCCTTTCCATCAACTACATGGATCGTTTCCTCTCCCTCGTCTCTCTTCCGGTACGATCCAGGTGGGCATTTCAGCTACTATCCGTGGCGTGTTTGTCTGTGGCGGCCAAAATGGAGGAGCCACAAGTGCCTCTCTTGCTTGACCTCCAGCTTTTCCAGCCAACCTTGCTGTTTCACCCCAAAACCCTTCGCAGAATGGAGCTTTGCCTCTTGTCTAATCTCAACTGGACACTCCGTTCCATTACCCCCTTCCATTACCTTCATTATTACCTCACCAACCTCCCTTCTTCTTCTTCTTCTTTCAACCGGTTACAGTTACTCTCCGCTGCCTCCGACCTCATCCTCGCCTCCACCCGTGTGATTAAGTTCTTGGAGTTTCCGCCGTCCGCCGTGGCAGCTGCCGCCGTCCTCTGCTCAGCTGGCCACCACCAGCCTCATGTATTCCACCACAGAGTAAACCATGAAATGGTGAGACGCTGTCACCAACTAATGGAGGACTACGTGCTGGACACGTGTCCCGCATCCACCACCAAAGCCACGCGAGGCCACCCGCCACCTCAAAGCCCCGTCGCCGTCCTCGACGTCTCCACCTGTGCCAGCTGCGACACCCCTTCTTCAGCCCACCCCCAACATGACCCGCCAAACAAGCGGCTGCGATCCTCTGCCCCGGATGTACGGCAGCCGTAA 981 0.5749 MSSSSPDHSTTSASMLCVEDASEAISDHPSPPSLAAVWQPYDDDSDISELIDAEARHMASADYLRRCGDGSVDVSARLDAINWMLKVQAFYEFHPVTAFLSINYMDRFLSLVSLPVRSRWAFQLLSVACLSVAAKMEEPQVPLLLDLQLFQPTLLFHPKTLRRMELCLLSNLNWTLRSITPFHYLHYYLTNLPSSSSSFNRLQLLSAASDLILASTRVIKFLEFPPSAVAAAAVLCSAGHHQPHVFHHRVNHEMVRRCHQLMEDYVLDTCPASTTKATRGHPPPQSPVAVLDVSTCASCDTPSSAHPQHDPPNKRLRSSAPDVRQP 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03428 326 SMART cyclin_7 82 170 IPR013763 -
Arst9g03428 326 FunFam D6-type cyclin 173 260 - -
Arst9g03428 326 SMART Cyclin_C_2 179 299 IPR004367 -
Arst9g03428 326 FunFam D6-type cyclin 60 172 - -
Arst9g03428 326 Pfam Cyclin, N-terminal domain 49 176 IPR006671 -
Arst9g03428 326 PANTHER CYCLINS 43 264 IPR039361 -
Arst9g03428 326 Gene3D - 49 242 - -
Arst9g03428 326 Gene3D - 60 177 - -
Arst9g03428 326 ProSitePatterns Cyclins signature. 77 108 IPR006671 -
Arst9g03428 326 MobiDBLite consensus disorder prediction 299 326 - -
Arst9g03428 326 Pfam Cyclin, C-terminal domain 179 278 IPR004367 -
Arst9g03428 326 CDD CYCLIN_AtCycD-like_rpt2 179 262 - -
Arst9g03428 326 SUPERFAMILY Cyclin-like 42 176 IPR036915 -
Arst9g03428 326 CDD CYCLIN_AtCycD-like_rpt1 76 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03428 Arst-Chr9 111282732 111284757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03428 47 276 Core Cell Cycle Gene Families AT1G70210 41.079 5.69e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03428 K18810 - gmx:100776178 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03428 9 111282732 111284757 Arst9g03428 9 111282732 111284757 ECH