Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03380 ATGTTCGACACCAAAAATATCACACTACCATTCTTACTTAGAACCCTAACACTAACAGTACTTTTGACTTCAGAACATGCCTCAGCTTCTGTTTTCGATTCAGTCAACTGCACAACCAACTCCACCTTCGCTCCAAACAGCACCTTCGACGTCAACCTCAGCACACTCTTCTCATATCTTACTTCCAACGTCACCAACGGCAACAATCTCAGGTTCTTCAACGCAACTGTAGGCTCTCACGGTTCAGACGCCGCCGTCTACGGCCTCTTCATGTGCCGTGGTGACGTGCCACTTGCACTGTGCCGAGAGTGCGTCGGTTTCGCAGCGCAGAACATAGCCTCGTCGTGTCCCTCTGCTAACGAGGCTGTCATCTGGTACAACGAGTGCTTGTTACGCTACTCCAACAGATTCTTCTTCTCCACCATGGACGAATGGCCAAGGTACCAGATCAAGATCCCGTTGGGGGACCCTGTGGTTTTGCACAGCAAAGGTTTCTACAGTGCTTTAGGGTCCATATTCAATGGGATTGGAAATGAAGCAGCCTTGGCTCTTGGCGGTTCTGATAACAAGTATGCAGTGAAACAAGCTGCCGCCACGGCCACCACCACAGTGTACGGTCTTGCTCAGTGCACGCCGGACCTCTCAGCCGCTGACTGCAAGCGGTGTATCGTGGACGCGACGGCTGAATTTCCAAGGACTTGCTGCGGCGGGAGCATAGGGGGAAGTGTTATGTTTCCAAGTTGCATTGTTAGGTATGAAACGTATCCGTTTTATCAGCATTCAGGTACCTCCGGGACATTAACAACAACTAATAAGGGAGGAGGAAATAGCAGAACACAAGTGATTGCTATGGTTGCAGTTGTGGTTGTGATTTTGGTGATGGTTTTATGCTTTGGCTACTTTTACCTTCGAAGAAAACTGAGGAAGAGACGCAAGACTGGTCTCAGAATCAGAAAAAACTTTAGGCCTGATATGAGTGCCTCAGAGTCTTTGGAATTTGATTTGGATACAATTCAATTCGCAACAAACAATTTTTCTCAAGGGAGCAGGATAGGAAAAGGAGGGTATGGAGAAGTCTACAAGGGAATTCTTCCAAGCGGAGAAGAAATAGCAGTGAAGAGGCTCTCAAGAAATTCGGGACAAGGGGCGGAGGAGTTCAAGAATGAAGTGTTGTTGATAGCTAAACTTCAGCACAGGAATTTGGTGAGGTTAATCGGATTCTGCCTCGAAGATCAAGAGAGTATACTTATCTATGAATATGTACCTAACAAGAGCCTTGATCACTTCCTATTTGATCCCTCCAAGCGAAGAGAATTAACTTGGTCGCAGCGTTATAAAATCATAAAGGGAATTGTTCGAGGAATTCTTTATCTTCATGAAGATTCTCGTCTCATGATAATACATCGAGACCTCAAACCAAGCAATGTTCTACTAGATAATCAAATGAATCCCAAAATTTCTGACTTTGGAATGGCGAGGATAGTAGATACAGATCACATCCAAGGATGTACTAACAGAGTAGTGGGCACATATGGTTATATGTCTCCGGAATATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTCATGGTTCTTGAGATTATAAGTGGAAAGAAGAATTCGTCTTCTTTTGATTCATGTCGTATTGACGACCTCTTGAGTTATGCATGGAAACTGTGGAATAGTGATGAATCAGTATTTCAATTGCTGGATCCAGTTCTGCAAGAATCTTATAATCCAAATGAAGTTGAAAGATGTATTCAGATTGGATTATTGTGTGTACAAGAAAATCCAGATGAGAGGCCTACAATGGGGACCATAGCTTCATATCTTACAAATGATTCAGTTGAAATGCCATATCCTCAGGAACCAGCATTTTTCATGAAAGGAAGGACAAGAAGGCATGCATCTGGACATGAATCATATTCATCAGGTCACACCACCAAATATTCTTTCTCATCCTCTGTAAATGACATGCCTACAACTGCTTTCTTCCCTCGATAG 2022 0.4377 MFDTKNITLPFLLRTLTLTVLLTSEHASASVFDSVNCTTNSTFAPNSTFDVNLSTLFSYLTSNVTNGNNLRFFNATVGSHGSDAAVYGLFMCRGDVPLALCRECVGFAAQNIASSCPSANEAVIWYNECLLRYSNRFFFSTMDEWPRYQIKIPLGDPVVLHSKGFYSALGSIFNGIGNEAALALGGSDNKYAVKQAAATATTTVYGLAQCTPDLSAADCKRCIVDATAEFPRTCCGGSIGGSVMFPSCIVRYETYPFYQHSGTSGTLTTTNKGGGNSRTQVIAMVAVVVVILVMVLCFGYFYLRRKLRKRRKTGLRIRKNFRPDMSASESLEFDLDTIQFATNNFSQGSRIGKGGYGEVYKGILPSGEEIAVKRLSRNSGQGAEEFKNEVLLIAKLQHRNLVRLIGFCLEDQESILIYEYVPNKSLDHFLFDPSKRRELTWSQRYKIIKGIVRGILYLHEDSRLMIIHRDLKPSNVLLDNQMNPKISDFGMARIVDTDHIQGCTNRVVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSSSFDSCRIDDLLSYAWKLWNSDESVFQLLDPVLQESYNPNEVERCIQIGLLCVQENPDERPTMGTIASYLTNDSVEMPYPQEPAFFMKGRTRRHASGHESYSSGHTTKYSFSSSVNDMPTTAFFPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03380 673 ProSiteProfiles Protein kinase domain profile. 345 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03380 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Arst9g03380 673 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 138 - -
Arst9g03380 673 Pfam Salt stress response/antifungal 165 255 IPR002902 -
Arst9g03380 673 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Arst9g03380 673 FunFam Cysteine-rich receptor-like protein kinase 10 306 420 - -
Arst9g03380 673 Gene3D Transferase(Phosphotransferase) domain 1 421 626 - -
Arst9g03380 673 Gene3D - 30 138 IPR038408 -
Arst9g03380 673 Gene3D - 159 257 IPR038408 -
Arst9g03380 673 Pfam Protein kinase domain 346 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03380 673 CDD STKc_IRAK 351 619 - -
Arst9g03380 673 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
Arst9g03380 673 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 665 - -
Arst9g03380 673 SUPERFAMILY Protein kinase-like (PK-like) 331 650 IPR011009 -
Arst9g03380 673 Gene3D Phosphorylase Kinase; domain 1 307 420 - -
Arst9g03380 673 ProSitePatterns Protein kinases ATP-binding region signature. 351 373 IPR017441 GO:0005524
Arst9g03380 673 SMART serkin_6 345 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03380 673 ProSiteProfiles Gnk2-homologous domain profile. 146 257 IPR002902 -
Arst9g03380 673 FunFam cysteine-rich receptor-like protein kinase 10 421 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03380 Arst-Chr9 111010856 111014877 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03380 37 673 Receptor kinase-like Gene Family AT4G05200 45.413 0.0 562
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g03380 Pkinase 7.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03380 - - var:108324780 925.235