Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03378 ATGTTCGACACCAAAAATATCACACTACCATTCTTACTTAGAACCCTAACACTAACAGTACTTTTGACTTCAGAACATGCCTCAGCTTCTGTTTTCGATTCAGTCAACTGCACAACCAACTCCACCTTCGCTCCAAACAGCACCTTCGACGTCAACCTCAGCACACTCTTCTCATATCTTACTTCCAACGTCACCAACGGCAACAATCTCAGGTTCTTCAACGCAACTGTAGGCTCTCACGGTTCAGACGCCGCCGTCTACGGCCTCTTCATGTGCCGTGGTGACGTGCCACTTGCACTGTGCCGAGAGTGCGTCGGTTTCGCAGCGCAGAACATAGCCTCGTCGTGTCCCTCTGCTAACGAGGCTGTCATCTGGTACAACGAGTGCTTGTTACGCTACTCCAACAGATTCTTCTTCTCCACCATGGACGAATGGCCAAGGTACCAGATCAAGATCCCGTTGGGGGACCCTGTGGTTTTGCACAGCAAAGGTTTCTACAGTGCTTTAGGGTCCATATTCAATGGGATTGGAAATGAAGCAGCCTTGGCTCTTGGCGGTTCTGATAACAAGTATGCAGTGAAACAAGCTGCCGCCACGGCCACCACCACAGTGTACGGTCTTGCTCAGTGCACGCCGGACCTCTCAGCCGCTGACTGCAAGCGGTGTATCGTGGACGCGACGGCTGAATTTCCAAGGACTTGCTGCGGCGGGAGCATAGGGGGAAGTGTTATGTTTCCAAGTTGCATTGTTAGGTATGAAACGTATCCGTTTTATCAGCATTCAGGTACCTCCGGGACATTAACAACAACTAATAAGGGAGGAGGAAATAGCAGAACACAAGTGATTGCTATGGTTGCAGTTGTGGTTGTGATTTTGGTGATGGTTTTATGCTTTGGCTACTTTTACCTTCGAAGAAAACTGAGGAAGAGACGCAAGACTGGTCTCAGAATCAGAAAAAACTGTAATTCCATTAGGCCTGATATGAGTGCCTCAGAGTCTTTGGAATTTGATTTGGATACAATTCAATTCGCAACAAACAATTTTTCTCAAGGGAGCAGGATAGGAAAAGGAGGGTATGGAGAAGTCTACAAGGGAATTCTTCCAAGCGGAGAAGAAATAGCAGTGAAGAGGCTCTCAAGAAATTCGGGACAAGGGGCGGAGGAGTTCAAGAATGAAGTGTTGTTGATAGCTAAACTTCAGCACAGGAATTTGGTGAGGTTAATCGGATTCTGCCTCGAAGATCAAGAGAGTATACTTATCTATGAATATGTACCTAACAAGAGCCTTGATCACTTCCTATTTGATCCCTCCAAGCGAAGAGAATTAACTTGGTCGCAGCGTTATAAAATCATAAAGGGAATTGTTCGAGGAATTCTTTATCTTCATGAAGATTCTCGTCTCATGATAATACATCGAGACCTCAAACCAAGCAATGTTCTACTAGATAATCAAATGAATCCCAAAATTTCTGACTTTGGAATGGCGAGGATAGTAGATACAGATCACATCCAAGGATGTACTAACAGAGTAGTGGGCACATATGGTTATATGTCTCCGGAATATGCAATGCATGGACAATTTTCAGTAAAATCAGATGTTTTTAGTTTTGGAGTCATGGTTCTTGAGATTATAAGTGGAAAGAAGAATTCGTCTTCTTTTGATTCATGTCGTATTGACGACCTCTTGAGTTATGCATGGAAACTGTGGAATAGTGATGAATCAGTATTTCAATTGCTGGATCCAGTTCTGCAAGAATCTTATAATCCAAATGAAGTTGAAAGATGTATTCAGATTGGATTATTGTGTGTACAAGAAAATCCAGATGAGAGGCCTACAATGGGGACCATAGCTTCATATCTTACAAATGATTCAGTTGAAATGCCATATCCTCAGGAACCAGCATTTTTCATGAAAGGAAGGACAAGAAGGCATGCATCTGGACATGAATCATATTCATCAGAATCTATACTAAAGAGATATTGGAAAGAATTGGTAGGAAGGACATAA 2007 0.4345 MFDTKNITLPFLLRTLTLTVLLTSEHASASVFDSVNCTTNSTFAPNSTFDVNLSTLFSYLTSNVTNGNNLRFFNATVGSHGSDAAVYGLFMCRGDVPLALCRECVGFAAQNIASSCPSANEAVIWYNECLLRYSNRFFFSTMDEWPRYQIKIPLGDPVVLHSKGFYSALGSIFNGIGNEAALALGGSDNKYAVKQAAATATTTVYGLAQCTPDLSAADCKRCIVDATAEFPRTCCGGSIGGSVMFPSCIVRYETYPFYQHSGTSGTLTTTNKGGGNSRTQVIAMVAVVVVILVMVLCFGYFYLRRKLRKRRKTGLRIRKNCNSIRPDMSASESLEFDLDTIQFATNNFSQGSRIGKGGYGEVYKGILPSGEEIAVKRLSRNSGQGAEEFKNEVLLIAKLQHRNLVRLIGFCLEDQESILIYEYVPNKSLDHFLFDPSKRRELTWSQRYKIIKGIVRGILYLHEDSRLMIIHRDLKPSNVLLDNQMNPKISDFGMARIVDTDHIQGCTNRVVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIISGKKNSSSFDSCRIDDLLSYAWKLWNSDESVFQLLDPVLQESYNPNEVERCIQIGLLCVQENPDERPTMGTIASYLTNDSVEMPYPQEPAFFMKGRTRRHASGHESYSSESILKRYWKELVGRT 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03378 668 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 30 138 - -
Arst9g03378 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Arst9g03378 668 ProSiteProfiles Protein kinase domain profile. 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03378 668 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03378 668 ProSiteProfiles Gnk2-homologous domain profile. 31 138 IPR002902 -
Arst9g03378 668 CDD STKc_IRAK 354 622 - -
Arst9g03378 668 Gene3D Phosphorylase Kinase; domain 1 311 423 - -
Arst9g03378 668 FunFam Cysteine-rich receptor-like protein kinase 10 308 423 - -
Arst9g03378 668 SUPERFAMILY Protein kinase-like (PK-like) 334 650 IPR011009 -
Arst9g03378 668 FunFam cysteine-rich receptor-like protein kinase 10 424 627 - -
Arst9g03378 668 SMART serkin_6 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03378 668 Gene3D - 30 138 IPR038408 -
Arst9g03378 668 Gene3D - 159 257 IPR038408 -
Arst9g03378 668 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Arst9g03378 668 ProSiteProfiles Gnk2-homologous domain profile. 146 257 IPR002902 -
Arst9g03378 668 Gene3D Transferase(Phosphotransferase) domain 1 424 629 - -
Arst9g03378 668 Pfam Salt stress response/antifungal 165 255 IPR002902 -
Arst9g03378 668 Pfam Salt stress response/antifungal 37 135 IPR002902 -
Arst9g03378 668 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 18 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03378 Arst-Chr9 111010855 111014877 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03378 37 638 Receptor kinase-like Gene Family AT4G05200 46.166 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g03378 Pkinase 7.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03378 - - var:108324780 892.108