Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03377 ATGTCGTTTCTTAAACTCATATTATTCAACTACCTTTGCTTCTTTCTCAGTCTCATCACCACCTTCAATTTGTTCATAACCGAAGCCAGTAATAATAATAATAATAATCATAGTAATGAGCTTGATTACTTGAAATGCGATTGTTTAAACAACAAAACCATCTCTCCTATTATTCCCACTACCATCTACAGATCCAACCTCCAAACCCTTCTCACCTCCCTCTCTTCCCACGCGGCCACCGCCGGCTTCTACAACGCCACCGCCGGCGGCGGCCACCCGAACGAAACAATCTATGGGATGTACATGTGCCGCGGTGACGTCAGCAACCAGACATGCCAAGAGTGCGTAGAAACAGCAAAGCAGGAAATAGGGTCAAGGTGTGGGAATAACTCGAAAGAAGGCATAATTTGGTACCACCAATGCTTCCTTCGCTACTCGAATCGTTCGTTCTTCTCTACCTTGGATGAGTGGCCTCGCCTTGAGTACATCGTTCACAACAATGGCAGCAATGCGGGCAATGAAGGAAGCTACGGGTGGTTGTTGGCGAGCACGTTGAACGAGGCAATTGAAGAGGCGAAGAGCAAGATGAAGAAATTTGCAACAAAACACGCGAGCTTGAATGGTTCTAAGAACGTATATACACTTGTTCAGTGCACTCCGGATCTGTGGAGAGAAGATTGCAGTAAGTGTTTGAATGATTTAATGAAGGATATTCCTATGTGCTGTTTGGGAACCGATGGTGGGATGGTTCTTTCTCCAAGCTGCAATTTGATGTTCGGATTACGCCAATTTTACTCCAATGTTACTATTCGTACCACCTGGAATTCACTACCTAATTCTAGACTTGGTAAATATCAAACTAAGCTTTCAGGGAAACCAAGTGGCAGAAGATTAAAGATTATCATAGCGTCTACTGTTCCTATTGTTGCTTTCTTGATGCTTTATTTCTTTGGCTATCATTTCCGGCGGATAAATGCTCTGCGGCGTTATAAGGCTATCCTTAAAGAAAATTTTGGAAACGAAAGTACTACTTTGGAGTCATTGCAATTTGACTTAGTTACGATTGAAGAAGCAACAAACAATTTTTCTTGTGCAAACTTGATAGGTAAAGGTGGATTTGGAGAAGTTTACAAGGGCATTCTTTCTGATGGACGAGAAATAGCGGTAAAAAGATTATCAATAACTTCCGAGCAAGGCATTGCGGAATTTAAGAATGAAGTTTTGCTGATAGCTAAACTTCAACACAGAAATCTTGTTGCATTATTGGGATTTTGCTTACAAGAAGGAGAGAAAATACTTATTTATGAATTTGTTCCTAACAAGAGCCTAGACTACTTTTTATTCGGTTCTGAACTGCATAGGCTATTAAGTTGGTGTGAGAGATTTAAAATTATAGGCGGAATTGCTAGTGCAATTCTTTATTTACATGAGTATTCTCGCCTCAAAATTATACACCGTGATATCAAACCTAGTAATATTTTATTAGATGCCAACATGAATCCTAAAATTTCAGATTTTGGCATGGCAAGAATGGTTGCTATTGATCAAGATCAAGGACGAACACGTAGAATTGTGGGAACATATGGTTATATGTCCCCAGAATATGCTATGTTAGGAAAATATTCGGAAAAATCTGATATCTTCAGTTTTGGAGTTATGATTTTGGAGATTGTTAGTGGCAAAAAAAATTCTTCTTATGACTCTTACTACAACGATGGTCTCTTGAGTCATGCTTGGAAGCAATGGAGAGATGGGACACCATTTGAAATACTGGACCCAAATCTACATGAATCATGTTCTCAAATGGAAGTGATTAGATGCATCCAAGTTGGTTTACTATGTGTTCAAGAAAATCCTAATGATAGGCCACAAATGGCAGAAGTAGTTTCATATCTAAGTAACCTCTCCATTGAGTTGCCATTTCCTCACGAGCCTGCTTTTTTTGTACATGGTAGAATGAATCCAAATATGGTCGCACTAGAAGTTGATTCAGGACACCTAAGCAATTGTTCCACTCAACATTCACTCAACGAAATGTCTATTAGTATCTCTGTTCCACGATAG 2064 0.3968 MSFLKLILFNYLCFFLSLITTFNLFITEASNNNNNNHSNELDYLKCDCLNNKTISPIIPTTIYRSNLQTLLTSLSSHAATAGFYNATAGGGHPNETIYGMYMCRGDVSNQTCQECVETAKQEIGSRCGNNSKEGIIWYHQCFLRYSNRSFFSTLDEWPRLEYIVHNNGSNAGNEGSYGWLLASTLNEAIEEAKSKMKKFATKHASLNGSKNVYTLVQCTPDLWREDCSKCLNDLMKDIPMCCLGTDGGMVLSPSCNLMFGLRQFYSNVTIRTTWNSLPNSRLGKYQTKLSGKPSGRRLKIIIASTVPIVAFLMLYFFGYHFRRINALRRYKAILKENFGNESTTLESLQFDLVTIEEATNNFSCANLIGKGGFGEVYKGILSDGREIAVKRLSITSEQGIAEFKNEVLLIAKLQHRNLVALLGFCLQEGEKILIYEFVPNKSLDYFLFGSELHRLLSWCERFKIIGGIASAILYLHEYSRLKIIHRDIKPSNILLDANMNPKISDFGMARMVAIDQDQGRTRRIVGTYGYMSPEYAMLGKYSEKSDIFSFGVMILEIVSGKKNSSYDSYYNDGLLSHAWKQWRDGTPFEILDPNLHESCSQMEVIRCIQVGLLCVQENPNDRPQMAEVVSYLSNLSIELPFPHEPAFFVHGRMNPNMVALEVDSGHLSNCSTQHSLNEMSISISVPR 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03377 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 483 495 IPR008271 GO:0004672|GO:0006468
Arst9g03377 687 Pfam Protein kinase domain 366 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03377 687 ProSiteProfiles Gnk2-homologous domain profile. 159 264 IPR002902 -
Arst9g03377 687 Gene3D - 160 264 IPR038408 -
Arst9g03377 687 Gene3D - 42 150 IPR038408 -
Arst9g03377 687 ProSitePatterns Protein kinases ATP-binding region signature. 368 390 IPR017441 GO:0005524
Arst9g03377 687 Coils Coil 182 202 - -
Arst9g03377 687 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 323 437 - -
Arst9g03377 687 SUPERFAMILY Protein kinase-like (PK-like) 345 653 IPR011009 -
Arst9g03377 687 Pfam Salt stress response/antifungal 174 259 IPR002902 -
Arst9g03377 687 Pfam Salt stress response/antifungal 48 147 IPR002902 -
Arst9g03377 687 Gene3D Phosphorylase Kinase; domain 1 326 437 - -
Arst9g03377 687 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 62 684 - -
Arst9g03377 687 CDD STKc_IRAK 368 635 - -
Arst9g03377 687 FunFam cysteine-rich receptor-like protein kinase 10 438 639 - -
Arst9g03377 687 SMART serkin_6 362 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03377 687 Gene3D Transferase(Phosphotransferase) domain 1 438 639 - -
Arst9g03377 687 ProSiteProfiles Gnk2-homologous domain profile. 42 150 IPR002902 -
Arst9g03377 687 FunFam Cysteine-rich receptor-like protein kinase 25 161 264 - -
Arst9g03377 687 ProSiteProfiles Protein kinase domain profile. 362 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03377 687 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 41 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03377 Arst-Chr9 111006442 111009991 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03377 43 687 Receptor kinase-like Gene Family AT4G05200 43.921 1.24e-174 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Arst9g03377 Pkinase 7.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03377 - - aip:110262495 1347.03