Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03355 ATGTCAAACCATTCCATGATGAACAACAATTCCTCAGGTAGTGATTATTTTCTAAGGAAAATTCTAGAGATACAAGATTTTGAGGTTGACACTGACAGCCACGCCAACATGCAACAACCTCCTCCTGGCTATGGCAGCGATCACCCCAAGAAGAAGCGCTACCAGCGCCACACGCCGTATCAGATACAAGAGATGGAAACGTTCTTCAAGGCGTGCCCTCACCCAGATGAGCAGCAAAGGATAGAGCTGGGTAATGTTTTGGGATTAGACCATTTGCAAATCAAGTTTTGGTTCCAGAACAAGCGAACCCAACTCAAGAATCAATATGAACGCAACGAGAACTTTGCACTGAAGAATGAGAATGAGGAGCTTCGAGCTGAGAACGAGAACTACAAGGAGATCCTAAATAGTATAAGATGTCATGGCTGCGGAGGCCCACCTCCTCCTCCATTGACCTATGACCAGATGAGGCAGGAGAATAACAAGCTAAGAGAACAGATTGAGTGGATGTCAACAATGATGTCTAACTGTGTTCTACAAGAGCCAGATAATACTTCCAACCCCAACATCACCAGGCCTCAGAATGTGCCTAATATAGAATCATCTCAGCAAAACAACACCAACAACATGATGCCTCAGACTCAGAGTGTGCCTAATCAAGAACTTGGTAACATGGCATCACCACCTCAGAGCAATAACATTGACATACTGTCTCCAAGTATGTTTAATCAAGGAATTATTGACAGCATGCGATTGACTCAGCAGAACAATGGCATTGACATGCCTCAGAATGTGATTAATCATGGAATTGTCAAAGACATGCCATCATCTCAGGCTCACAACAATGTTATTAACGTGACTCCGCCTATGAGTATGTTAAATCAGGGAATTGGTGATAACATTGCCGTTATTCCTCCTAGTGTGCTTGATCAAGGAAATTGTAGCGTGCCATCATCATCTCAACACAACAACGAAATTTACATTAACCTGCCTTTGAGTTCGCTTAATCAAGATGTTGGTAGCTATGGAGCAAAGTCAAAAGACAAAGCAGGGGAAACGAGTAGTGGTAGTGACCCTCTAATTAGGTCACTCCCAGTTTCTAACAAAGCCATGATCGAGGAGCTTGCGGCTGCGTCACTGGAGGAACTCAAAGCCTTGGTTCAAGCAGGGGAGCCCATGTGGGTCAGTGGGGCCCACAACTCTGAAACTATCAACGAACAAGAATACTATAGGACTTTCCCTGGTGGAATTGGTCCAAGACTCTTGGGGTATAAATCTGAATCTTCAAGGGAATCCAGGGTCATCAACATGAATCACGTTAACCTCGTTGAGATCCTTAATGATGTGGATCTATGGTCACGTGTGTTTTGCAGCATTGTTTCAAAAGCAGCAGGATTTCAAGTCCTATCAACTGGACAGGCAGGAAGTTATGATGGAAACTTGCAAGTGGTGTCATCAGAGTTCCAAATGCCAACACCACTTGTTCCTGCTCGCGAGTACTATTTCCTAAGGTACTGCAAGAAGCTCCAAGATGGGAGATGGGTGGTGGTCGATGCTTCTCTGGAAACTTCACAACCAAATGCAACAATCCCTCCGACTCGAAGAAGGCCCTCTGGTTGCCTGATTCAGGCATCCCCAGATGGTTACTCAACAAAGGTTACCTGGGTTGAACATGTAGAAGTGGATGACAGAGCACTAATGGTGAATAGTATGTATAAGCCTCTAGTTGAATCTGGCTTAGCCTTTGGAGCTAGACGCTGGGTCGCACAATTAGATAGAAGATGCGAACGTATTGCTAGTGCAGTACAAACCACCACCATACTGCAACCACAAGAAGACCAACTTAGTGTGACGAGTGTTGAGGGCAAAAAGGGGTTGGTGAAGCTGGCAGAGAGAATGGTTATGGACTTTTTAAGTGGTGTTGGTGCTTCAACAGTAGAAAATTGGGCAATCGTAACTCCATCAACAAATCACAGCAATATAAGAATCATAACCAGAAAGGTTGAGGACGATCCAGGTAGACCTTCCGGTATAGTTATCGGTGCCGCAACTTGTTTCCACCTCGCAGTTCCTCCAAACAGCTTCTTTGATAGGGTTCGAACTGCAAACGCAAGAGCAGAGTGGGATGTTCTCTGTACCGGAGGTGTTGCTGAGGAATTTGCACACATAAAAAATGGTCGCGACCCTGGGAACTGTATCACATTATTCCGTATTAAGAGTCCAGATGCGAAGAACAACGGGATGATAATAGTTCAAGAGAGTAGCAGCGATTCAACAGGGTCATTTGTGATATACGCACCGGTTGATATGAATTCGATCAATGCAGTGATTGGAGGGAGAGATCCCGATGAACTTCCGATTTTGCCCTCGGGAATGGCGATTCTTCCAGATGGAGGTGGAGGTTGTTTGGTGACGTTGGCATTCCAGATATTGATCGAGTCAGATCCAACAAAGAAGATATCGATCTGTTCAGTGAGCACTATTAACCAGTTGGTTAAGGTTACGGTTAACAACATCAAAGCTCTATTCAAGACTGAGGAGGAACCTAACGAGAGAATCTAA 2562 0.4477 MSNHSMMNNNSSGSDYFLRKILEIQDFEVDTDSHANMQQPPPGYGSDHPKKKRYQRHTPYQIQEMETFFKACPHPDEQQRIELGNVLGLDHLQIKFWFQNKRTQLKNQYERNENFALKNENEELRAENENYKEILNSIRCHGCGGPPPPPLTYDQMRQENNKLREQIEWMSTMMSNCVLQEPDNTSNPNITRPQNVPNIESSQQNNTNNMMPQTQSVPNQELGNMASPPQSNNIDILSPSMFNQGIIDSMRLTQQNNGIDMPQNVINHGIVKDMPSSQAHNNVINVTPPMSMLNQGIGDNIAVIPPSVLDQGNCSVPSSSQHNNEIYINLPLSSLNQDVGSYGAKSKDKAGETSSGSDPLIRSLPVSNKAMIEELAAASLEELKALVQAGEPMWVSGAHNSETINEQEYYRTFPGGIGPRLLGYKSESSRESRVINMNHVNLVEILNDVDLWSRVFCSIVSKAAGFQVLSTGQAGSYDGNLQVVSSEFQMPTPLVPAREYYFLRYCKKLQDGRWVVVDASLETSQPNATIPPTRRRPSGCLIQASPDGYSTKVTWVEHVEVDDRALMVNSMYKPLVESGLAFGARRWVAQLDRRCERIASAVQTTTILQPQEDQLSVTSVEGKKGLVKLAERMVMDFLSGVGASTVENWAIVTPSTNHSNIRIITRKVEDDPGRPSGIVIGAATCFHLAVPPNSFFDRVRTANARAEWDVLCTGGVAEEFAHIKNGRDPGNCITLFRIKSPDAKNNGMIIVQESSSDSTGSFVIYAPVDMNSINAVIGGRDPDELPILPSGMAILPDGGGGCLVTLAFQILIESDPTKKISICSVSTINQLVKVTVNNIKALFKTEEEPNERI 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03355 853 CDD START_ArGLABRA2_like 369 596 - -
Arst9g03355 853 MobiDBLite consensus disorder prediction 33 54 - -
Arst9g03355 853 Pfam Homeodomain 51 106 IPR001356 GO:0003677
Arst9g03355 853 Coils Coil 153 173 - -
Arst9g03355 853 Gene3D - 38 123 - -
Arst9g03355 853 Gene3D - 433 591 IPR023393 -
Arst9g03355 853 ProSiteProfiles START domain profile. 365 600 IPR002913 GO:0008289
Arst9g03355 853 SMART START_1 374 597 IPR002913 GO:0008289
Arst9g03355 853 SUPERFAMILY Homeodomain-like 45 110 IPR009057 -
Arst9g03355 853 SUPERFAMILY Bet v1-like 369 599 - -
Arst9g03355 853 Coils Coil 107 141 - -
Arst9g03355 853 Pfam START domain 375 597 IPR002913 GO:0008289
Arst9g03355 853 FunFam Homeobox-leucine zipper protein HDG1 41 124 - -
Arst9g03355 853 SUPERFAMILY Bet v1-like 622 813 - -
Arst9g03355 853 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 50 843 IPR042160 -
Arst9g03355 853 ProSiteProfiles 'Homeobox' domain profile. 48 108 IPR001356 GO:0003677
Arst9g03355 853 SMART HOX_1 50 112 IPR001356 GO:0003677
Arst9g03355 853 MobiDBLite consensus disorder prediction 339 361 - -
Arst9g03355 853 CDD homeodomain 51 108 IPR001356 GO:0003677
Arst9g03355 853 MobiDBLite consensus disorder prediction 183 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03355 Arst-Chr9 110804465 110808041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03355 326 841 Homeobox Transcription Factor Family AT4G04890 51.481 0.0 557
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst9g03355 START 5.4e-42 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03355 K09338 - gmx:100782240 563.148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03355 9 110804465 110808041 Arst9g03355 9 110804465 110808041 ECH
Arst9g03355 9 110804465 110808041 Arst5g01672 5 19542033 19545598 ECH
Arst5g01672 5 19542033 19545598 Arst9g03355 9 110804465 110808041 PCT