Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03338 ATGAAGGATTTCTTGGGTTCCGTTCGCCAATCCTTTGTCTTCAGAACTCCACCGCCAGCCACCGCCACCACCGACGAAGATGGACTATTCGCCGGATTCGTCGACCGGATCAGCTCCACCATCCGCAAGTCCCGCGTCGGACTCTTCTCTCAGCCCCGCCTCAAGCATCCCCGTCTTCCTTCGCCGCCGACACCTCCCAAGTGCTCCGACGACGCCCCTCCTTTCCGGTGGCGGAAGGGCGAACTGATCGGCAGCGGCGCCTTCGGTCGAGTGTACATGGGCATGAATCTCGACTCTGGCGAGCTTATTGCTGTCAAACAGGTTTTGATTGCGCCTGGTTGTGCTTCAAAGAAGAATACTCAAGCTAATAATATTCGGGAGCTTGAAGAAGAAGTGAAGCTTCTCAAGAATCTTAAGCATCCAAACATTGTTAGATACTTGGGAACCGCTAGAGAGGAGGATTCCTTAAATATTCTACTAGAGTTTGTTCCCGGTGGGTCTATCTCTTCGCTCCTTGGGAAATTTGGATCATTCCCTGAGCCAGTTATCAAAATGTATACAAAACAGCTTCTACTGGGCCTTGAATACCTTCATGATAACGGGATTATTCATAGAGATATTAAGGGTGCAAACATTCTAGTTGATAACAAAGGGTGCATCAAACTAGCGGACTTCGGTGCATCCAAGAAAGTTGTTGAACTGGCAACCATAAATGGTACGAAGTCAATAAAGGGTACGCCGCATTGGATGTCTCCTGAAGTCATTTTACAGACAGGACATACAATCTCTACTGACATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGGAAACCTCCATGGAGTCAACAGTATCCTCAGGAGGCTTCTGCTCTTTACTACATTGGGACAACTAAATCTCATCCACCCATACCTGAATATCTGTCTGCCGAGGCACAGGACTTTTTGCTGAAATGCTTCCACAAGGAACCAGATCTGAGGCCTTCTGCATCAGACTTGCTACTGCATCCTTTCATCTCCTGCAATTACCGCGAATCTCATTCGATGTTATGCAGTTCAATCAGGGACTCTTGCAATGCAACACATGAGAAGAAACCTAGAGACTTTTTGGATTCTGTTCGGGGATCAACCTGCACAGGCGTGAAGGATGTCTGTCAACTGGATAGCATAAGACTCTCAACTATGTGTTCTGAAAATTTTCTAAAGGCAGATTGCTACCAGAGAGCTGACAGCAATGATGATGACATATGTCAGATAGCTGATGAAGATGATTTTTTAGTTGACACATCAGTAAAACCAAAATCTCTATCTACTTCTGAAGATATAAAGAGTTTCAATCCAATGTGTGAACCTGTGGATGACTGGCCTTGCAAGTTTGATGAAGATCTAAATTTAAAGGAAAGCAGAATGAACTTGTCTTCAGCTCAAGCTGTTAGTGAAACTATGACAGGTGCTGAACCATATCCTGACGTGAAGGATAAATTCTCATTTTCATGTGAGCATTCAGGAGATGAAGATGATGATGAAGTTACTGAGTCCAAAATTAAAGCCTTCCTGGATGAGAAGGCCATTGAACTGAAGAAACTCCAAACACCTCTTTTTGAAGAATATCTTAGTGTTTCAAATGCAGCCATTGCACCTATTGCAATTGCACCAAGCAATGATGTTTCGAAAATCCCAAATGCAACATCACAGGGTAGATCTCCTAGTCATGCTAGGAGACGATTGTCAATGGCTGGTAGTGCCAGTGTTTCAAGCAGTAAGAGTCATAACAAATATCAACCACAGCTTGGTGGTGCACCGAATCAACCTTTGCAGGAAATCCAGCCTTCTGATCTTAACGAATCAAAGGAGACTCTTCATGAAGCTCAGCCAGGTTCATTCAGTGTCAGGGCGAGCTTCTCTGAGAGACAAAGAAAATGGAAAGAAGAACTTGTTAAAAGAAAATGGAAAGAAGATCTTTTTAAAGAGATGGACTTTAAGCGAGAGATTTGGCGTAAGGCAGGATTAGGAGGGAAGATAACTTCACCGAAGGATTGCGAGTTTTATGGAGACTGA 2064 0.4453 MKDFLGSVRQSFVFRTPPPATATTDEDGLFAGFVDRISSTIRKSRVGLFSQPRLKHPRLPSPPTPPKCSDDAPPFRWRKGELIGSGAFGRVYMGMNLDSGELIAVKQVLIAPGCASKKNTQANNIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPEPVIKMYTKQLLLGLEYLHDNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGTKSIKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEASALYYIGTTKSHPPIPEYLSAEAQDFLLKCFHKEPDLRPSASDLLLHPFISCNYRESHSMLCSSIRDSCNATHEKKPRDFLDSVRGSTCTGVKDVCQLDSIRLSTMCSENFLKADCYQRADSNDDDICQIADEDDFLVDTSVKPKSLSTSEDIKSFNPMCEPVDDWPCKFDEDLNLKESRMNLSSAQAVSETMTGAEPYPDVKDKFSFSCEHSGDEDDDEVTESKIKAFLDEKAIELKKLQTPLFEEYLSVSNAAIAPIAIAPSNDVSKIPNATSQGRSPSHARRRLSMAGSASVSSSKSHNKYQPQLGGAPNQPLQEIQPSDLNESKETLHEAQPGSFSVRASFSERQRKWKEELVKRKWKEDLFKEMDFKREIWRKAGLGGKITSPKDCEFYGD 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03338 687 MobiDBLite consensus disorder prediction 581 615 - -
Arst9g03338 687 ProSitePatterns Protein kinases ATP-binding region signature. 83 106 IPR017441 GO:0005524
Arst9g03338 687 CDD STKc_MAPKKK 76 341 - -
Arst9g03338 687 MobiDBLite consensus disorder prediction 622 636 - -
Arst9g03338 687 MobiDBLite consensus disorder prediction 558 573 - -
Arst9g03338 687 Pfam Protein kinase domain 78 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03338 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Arst9g03338 687 Coils Coil 118 138 - -
Arst9g03338 687 MobiDBLite consensus disorder prediction 557 640 - -
Arst9g03338 687 SUPERFAMILY Protein kinase-like (PK-like) 76 342 IPR011009 -
Arst9g03338 687 FunFam Serine/threonine-protein kinase STE11 74 168 - -
Arst9g03338 687 FunFam Mitogen-activated protein kinase kinase kinase 2 76 369 - -
Arst9g03338 687 SMART serkin_6 77 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03338 687 ProSiteProfiles Protein kinase domain profile. 77 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03338 687 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 57 349 - -
Arst9g03338 687 Gene3D Transferase(Phosphotransferase) domain 1 76 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03338 Arst-Chr9 110707339 110712133 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03338 1 675 MAP Kinase Kinase Kinase AT3G06030 54.772 0.0 645
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Arst9g03338 Pkinase 2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03338 K20606 - gmx:100795863 859.366