Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03327 ATGGAGCTTCACAAGCGCCACGTCCACAGCCTCTCCGAGAGGAAGGGCCAGAAGCGCAAGCTCGATGACCAGCTCCATGCCAACCGCCAGATCTCGCCGCCACCGCCAACGGCCGACGAGCGCGCCGCTATCCTCTGCCAAGCCTCTGAGCAGGTCCGCGTCCTTGACTCCACCTTCACGTGGAACGAAGCCGATCGAGCTGCCGCTAAGCGCGCCACTCACACGCTCGCCGATCTCGCCAAGAACGAGGAAGTTGCTAACGTGATTGTCGAAGGAGGCGCTATTCGAGCTCTGGTTAGGCACCTTCAGGCGCCACCTATCGGCGACGACGACCGTGTGCAGAAGCCGTTGCCGTTTGAGCATGAGGTTGAGAAAGGGAGCGCTTTCGCACTAGGACTACTTGCCGTCAAGCCAGAACATCAACAGCTCATTGTTGACAGTGGTGCCTTGATTCATCTTGTTGATCTTTTAAAGAGGCATAAGAATGGTTTAACTTCTCGTGCCATTAATAGTCTCATTCGTAGGGCTGCAGATGCCATCACTAATCTTGCTCACGAGAACAGCAGCATTAAAACTCGTGTCAGGATGGAAGGTGGAATTCCACCACTTGTTCATTTGCTTGAATTTGCAGATCCAAAAGTACAAAGAGCAGCTGCTAGTGCACTGCGAACCCTGGCTTTCAAAAATGATGAAAATAAAAATCAGATCGTTGAATGCAATGCTCTTCCAAATCTAATTCTAATGCTTCGCTCTGAAGATGCAGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTTCACTCTTCCCCTAATATAAAGAAAGAAGTTCTTCTTGCTGGAGCTTTACAACCAGTTATTGGATTACTTAGCTCGTGCTGCTCTGAAAGCCAGAGGGAAGCAGCCTTGTTACTTGGGCAGTTTGCAGCAACTGATTCAGATTGTAAGGTTCATATTGTACAGAGAGGTGCTGTCCAGCCATTGATAGAGATGCTTCAATCTCCAGATGTACAACTCCAAGAAATGTCTGCCTTTGCGTTGGGGAGATTAGCCCAGGACACACATAACCAAGCTGGCCTTGCACATAATGGTGGCTTGGTGCCATTGCTGAATCTTCTTGATTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGTCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTTGGTGGAGTTCAGAGGTTGCAGGAAGGAGAGTTTATCGTTCAAGCAACTAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAAGAGAAGATTCGTGGCCGTGTAAGCACATTGCACATTCACATGTTATTGTTTCTTGTATAAACTAGTTTTGAGTTCGTTCTAATTTGAAGCTGACTATCTGTACATGCAGGTCTCGAGTTGCTTATTGGGCTTCTTGGCTCATCTGGCTCTAAGCAGCAACTTGATGGTGCTGTTGCTTTATGCAAGTTGGCCAACAAAGCCTCAACTTTGTCTCCCATGGATGCTGCCCCCCTTTCTCCAACACCACAGGTATATTTAGGGGAGAAGTTTGTAAACAATGCCACGTTGTCAGATGTTACATTTTTGGTTGAAGGCAAACGGTTTTATGCTCACAGAATATGTCTACTAGCGTCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGAGAAGGATGCAAAGGATATTGAGATTCCAAATATTAGATGGGAAATTTTTGAGCTGATGATGAGATTTATATATACTGGATCAACTGAAATCACTCTGGATATAGCTCAAGACCTTCTCCGAGCAGCTGATCAATATCTATTAGAAGGACTTAAGAGGCTCTGTGAATACACAATTGCAAAGGATATATCACTGGAGAACGTGTCAAGTATGTATGAACTTTCAGAAGCATTTAGTGCAGTATCATTGAGGCACTCGTGCATCCTTTTTATATTGGAGCAATTTGATAAATTGAGTGCAAGGCCTGGGCACTCTCTTCTGATTCAGCGTATAATACCAGAGATTCGTAATTACTTCATTAAAGTTCTTATGAAGACCAACTCCCGTAACATTCGACTGTAA 2094 0.4499 MELHKRHVHSLSERKGQKRKLDDQLHANRQISPPPPTADERAAILCQASEQVRVLDSTFTWNEADRAAAKRATHTLADLAKNEEVANVIVEGGAIRALVRHLQAPPIGDDDRVQKPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALIHLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRMEGGIPPLVHLLEFADPKVQRAAASALRTLAFKNDENKNQIVECNALPNLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVQPLIEMLQSPDVQLQEMSAFALGRLAQDTHNQAGLAHNGGLVPLLNLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQRLQEGEFIVQATKDCVAKTLKRLEEKIRGRVSTLHIHMLLFLVXTSFEFVLIXSXLSVHAGLELLIGLLGSSGSKQQLDGAVALCKLANKASTLSPMDAAPLSPTPQVYLGEKFVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDAKDIEIPNIRWEIFELMMRFIYTGSTEITLDIAQDLLRAADQYLLEGLKRLCEYTIAKDISLENVSSMYELSEAFSAVSLRHSCILFILEQFDKLSARPGHSLLIQRIIPEIRNYFIKVLMKTNSRNIRL 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03327 697 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 691 IPR044282 -
Arst9g03327 697 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 691 IPR044282 -
Arst9g03327 697 Gene3D Potassium Channel Kv1.1; Chain A 519 656 IPR011333 -
Arst9g03327 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 365 407 IPR000225 GO:0005515
Arst9g03327 697 Gene3D - 269 437 IPR011989 -
Arst9g03327 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 324 366 IPR000225 GO:0005515
Arst9g03327 697 SUPERFAMILY POZ domain 522 625 IPR011333 -
Arst9g03327 697 Gene3D - 169 268 IPR011989 -
Arst9g03327 697 SMART arm_5 354 394 IPR000225 GO:0005515
Arst9g03327 697 SMART arm_5 313 353 IPR000225 GO:0005515
Arst9g03327 697 SMART arm_5 187 227 IPR000225 GO:0005515
Arst9g03327 697 SMART arm_5 271 311 IPR000225 GO:0005515
Arst9g03327 697 SMART arm_5 82 136 IPR000225 GO:0005515
Arst9g03327 697 SMART arm_5 137 185 IPR000225 GO:0005515
Arst9g03327 697 SMART arm_5 229 269 IPR000225 GO:0005515
Arst9g03327 697 Pfam Armadillo/beta-catenin-like repeat 194 226 IPR000225 GO:0005515
Arst9g03327 697 Pfam Armadillo/beta-catenin-like repeat 313 352 IPR000225 GO:0005515
Arst9g03327 697 Pfam Armadillo/beta-catenin-like repeat 229 268 IPR000225 GO:0005515
Arst9g03327 697 SUPERFAMILY ARM repeat 63 413 IPR016024 -
Arst9g03327 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 198 233 IPR000225 GO:0005515
Arst9g03327 697 MobiDBLite consensus disorder prediction 1 26 - -
Arst9g03327 697 CDD BTB_POZ_ARIA_plant 517 632 - -
Arst9g03327 697 Pfam BTB/POZ domain 524 624 IPR000210 GO:0005515
Arst9g03327 697 ProSiteProfiles BTB domain profile. 530 597 IPR000210 GO:0005515
Arst9g03327 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 148 198 IPR000225 GO:0005515
Arst9g03327 697 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 240 282 IPR000225 GO:0005515
Arst9g03327 697 SMART BTB_4 530 627 IPR000210 GO:0005515
Arst9g03327 697 Gene3D - 37 168 IPR011989 -
Arst9g03327 697 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03327 Arst-Chr9 110577699 110583850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03327 297 411 U-box Gene Family AT3G46510 29.915 3.78e-06 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Arst9g03327 BTB 4.8e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03327 - - gmx:100784348 1135.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03327 9 110577699 110583850 Arst9g03327 9 110577699 110583850 ECH
Arst5g01648 5 18798705 18805609 Arst9g03327 9 110577699 110583850 PCT