Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03296 ATGAATGGTGGTGCAAGTGCTGAGGCAGAGGCAGAGTACTCTGAATTTGTGGAAGTTGATCCTAGTGGAAGATATGGAAGATATAATGAAATTCTTGGTAAAGGAGCTTCCAAGACAGTTTATAGAGCATTTGATGAGTATGAAGGGATAGAAGTTGCATGGAACCAAGTGAAGCTTTACGACTTTCTGCAGAATCCAGAAGACCTTGAGAGATTATACTGTGAAATTCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTACACTTCCTGGGTTGATACTACCAACAGACACATAAATTTTGTCACTGAGATGTTCACTTCTGGGACTCTAAGACAGTACAGGCTTAAACACAGAAGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGGCAGGTTTTGGAAGGGCTTCTCTATCTACACAGCCATGACCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGAGAAGTTAAAATTGGGGATCTTGGCCTTGCTGCAATTCTTCGCAAATCTAATGCCGCTCGCTGTGTTGGCACACCTGAGTTTATGGCCCCTGAAGTATATGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGCATCTTGGAGATGGTCACCTTTGAATATCCTTATAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTTCCTCTGGGAAAATGCCAGAGGCTCTTTACAAAGTAAATGATCCCGAGGTTCGGCAATTCGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCAAAGGAACTATTGGAGGACCCTTTTCTCCAACTTGATGATTATGGATATGACTTGAAACCATTCCAATATCAAAGAGACTGCTTTGAAGTAACCCCAATAATTAGACAGTCTCTTAATGGAATTCATAGCAGCAACACCACCTTAATGAGTGGCTCCACCGATAATCCTGGTGGTTATGGACCTGTGTCTGAACTGGATTATCACCAAGATGATTTTGAAACAAGTGAAATAGATCTCTTTGATTGTGAGGAGGACGAAAAATTAGCTGAATTCGACGCCTCAATTAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTCTGAGAATCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTATTTCCCGTTTGACACCGAGACTGATACTGCATTGAGCGTTGCTTCTGAAATGATAGCTGAACTTGACATAACTGACCAAGATGTAACAAAGTTAGCAGATATGATAGATAATGAAATTGCAAACTTGGTCCCTGAGTGGAAAAGGGGACCCAGAATAGAGGAAAGTTTACAATGTGAAAGTGAACATTTCTGCCACAATTGTGCTAGAAACGGTTCTTTATTTGATTATGCATCATCAGATAATCCATGTGCCAAGAATCTGCAATTTTTCCATTGTTCTAAGAACGGATGCGCAGCAGTTCATGGCAGATTCGAGGAGATTACTTATCAAGTTGAAGGGTCTGAAAACTGTGCTACAGAAGGTGCACAAGATCCATCATACCAACCCAAAGGCATTAGTTGTACTGATATCTGGGCGCAGCGCGATGAACCAGACTTGTGTTCTGAAGAGTTAAAAGACATACAATGTGACGACAAGTCTAATGAGACATCAAATCAATCAACCATCAAGGATGGTGGAAGAACTATTGATGTGGATGACCAAAGTGATCTCAATGCTAGAAAGCTACCTTCTATTCCTTCATCGGATTGTGTTCTTCTGGACTATGAGAATGAAATTAGACAAGAACTGAGATGGCTAAAAGCAAAGTACCAGATGCAGTTAAGAGAGCTTAGAGACCAGCAACTAGGGAGTAAATCAAAATTTGCTAGCACATCCCCTGACACCGAAAAATTAGAGCTATCAGCTACATCCCACTCGAAGTTACAGGACAAGAAATCATTGCTGAGGCCTATGGTTTGTGGTAACAATTTTCTTGTTGATGCTGAGAAGTGCACAAGTTTGGCTGATCAAATGGTTCAAAATGGTGATGAGACAAGTGAGGCTAACAGTCCAGAACAAATGATCACAGCCAAGGATTTCTTTGCAGGAGCCTTGCTTCCACAGTCCCTTTATAGGGCCACTTCTCTTCCTGTTGATGCAGTAGATGTCTAG 2181 0.4113 MNGGASAEAEAEYSEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYCEIHLLKTLKHKNIMKFYTSWVDTTNRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQVLEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVSSGKMPEALYKVNDPEVRQFVEKCLATVSLRLSAKELLEDPFLQLDDYGYDLKPFQYQRDCFEVTPIIRQSLNGIHSSNTTLMSGSTDNPGGYGPVSELDYHQDDFETSEIDLFDCEEDEKLAEFDASIKGRRREDDGIFLRIRIADKEGRVRNIYFPFDTETDTALSVASEMIAELDITDQDVTKLADMIDNEIANLVPEWKRGPRIEESLQCESEHFCHNCARNGSLFDYASSDNPCAKNLQFFHCSKNGCAAVHGRFEEITYQVEGSENCATEGAQDPSYQPKGISCTDIWAQRDEPDLCSEELKDIQCDDKSNETSNQSTIKDGGRTIDVDDQSDLNARKLPSIPSSDCVLLDYENEIRQELRWLKAKYQMQLRELRDQQLGSKSKFASTSPDTEKLELSATSHSKLQDKKSLLRPMVCGNNFLVDAEKCTSLADQMVQNGDETSEANSPEQMITAKDFFAGALLPQSLYRATSLPVDAVDV 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03296 726 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03296 726 FunFam Probable serine/threonine-protein kinase WNK1 11 107 - -
Arst9g03296 726 CDD STKc_WNK 24 283 - -
Arst9g03296 726 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 651 - -
Arst9g03296 726 ProSiteProfiles Protein kinase domain profile. 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03296 726 Coils Coil 603 623 - -
Arst9g03296 726 Gene3D Transferase(Phosphotransferase) domain 1 109 288 - -
Arst9g03296 726 Gene3D - 378 473 - -
Arst9g03296 726 SMART serkin_6 26 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03296 726 FunFam probable serine/threonine-protein kinase WNK9 109 288 - -
Arst9g03296 726 MobiDBLite consensus disorder prediction 624 642 - -
Arst9g03296 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Arst9g03296 726 MobiDBLite consensus disorder prediction 624 646 - -
Arst9g03296 726 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Arst9g03296 726 MobiDBLite consensus disorder prediction 554 573 - -
Arst9g03296 726 SUPERFAMILY Protein kinase-like (PK-like) 29 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03296 Arst-Chr9 110327045 110330788 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03296 1 503 MAP Kinase Kinase Kinase AT3G22420 58.640 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Arst9g03296 Pkinase 1.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03296 K08867 - gmx:100804179 1186.79