Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03293 ATGGAACCGGGCATGAGATCCGATGGCCCTTCTGGGGCTTTGGTGAAGAACAGGAGATCTTCAGGGTGTTTGGTTGTTAGGAAGAAAGGTGATGGATTGAGTGGTGGGGTTGGTAGTTCTTTCAGCTCCAGGAAGCTGAATGCATCAAAGAAAGGGAAGAAGAGGCCCAAGGTTGAGTTAAGTAGTAGCGATTCGGAATCGAGTCAGGAGCTATTGATGCCATCTTCTAGAGGGCTTGGTCCTGAGACCATTCGAGTATGCAATGGTTTGACAGCTGTTAAGCGGGACGAGGCTGGTGATGGTGGAACTGGAAGGAAGCGGGAGAGGTTTGAGGACATTAGTCATAACGGTGATGAGATGGGGGAGGGAAATGGTTCAGAGAGGAGGGAAAAGAAACTTAGCAAGATTGATGTGTTTGATTTCGACGAATACGATGCTATGGATGCAGACATGATGAGAAGGAGCCATGTAGATAGCAATGGGGGCGGCTTTGGAGGGGAAAGGCTTGGGGGAGCAATGCATGCTGCTAGAGGTGGCACTGATAGGGAATTCAAAACTGGTTCAAGCAGACACACCCTTAATAAGAGAAAGAACTCCCATTGTGATAAGGCAAGTCACTTGCACCCAAGAGATAGTAAATTAAAGAAGTGGGATGCAGCTCAGCATCCTCAGCCCGTGCCGAAGGAGAAGTTTAATTCTGATGAATCCATTAGGGTTCAAGGGAAAAATGGTGTTTTAAAGGTGATGGTTAATAAGAAGATGTGTAAGCCATCAAAGCACGTTGATAATCGCAAACATGTAGAAGGGCAACGAAGTTTGAGGGCTGAGGGCATTGCCAAGAAGAATGTTCTGATCCATCCTTCATCTTGCTTGGAAAAAAAACCTGTTAAGAAACAAGGTTTACATGCTAGGACAGAGAAGAAATTGGTAGCAAGAAGAAAATCTTTGTCAAGTAACGACACTAAGGGTGATGACCAGGATTCAGATAACAGTGGCACATCATTGAATGTGGGAGTGAAGTGCATTAAAGCTTTCAAGTCTTTAAAGAGGGGGACCTCGGACGATGAACAGACTCCTAAGCATGAAAAGACCCCAACCACAGCAGGAACTAAAAAGGAGAAAATAAGGCGTGGTAGTGGCACAGAAAAGCAGAAGCTACGAGAACAGATACGGGAGATGCTTCTTAATGCAGGTTGGACCATAGACTATCGCCCTCGGAGGAAGAGAGACTATCTTGATGCAGTTTACATTAATCCTGGGGGTACAGCCTATTGGTCCATCATCAAGGCCTATGAGGCGTTTCAGAAGCAATTGAGTGCTGACGACCCTGGGGCCAAGCCCAATGGGGAGTGCTCTTCTTTTGCTCGTATCACAGATGATGTGCTTAGTCAGTTAACAAGGAATACTCAGAAGAAGATGGAGAGAGAATTAAAGAAGAAGAAGAAGAAGAAACAGAAGAAGGAAAGAGATGATAGTGAGAGTGATAGTGGAAAAGAACCTCGCATTAAGAGATCTTTAAGCAACAAGCGTGATATGAATGGCATGGAAAGTGATAGTGATGAAGAGAAATTAAGCTCCTTTTTAAAGCGGGAGCGTAAGTCAATGAAAAATAAAATGATTGAAAATACTGTTAACAGTTGTAGATCTACAAGCAAGAAAGCTGACCTTCACACAGATGAAGGAACTGAAAAATCACTTTTAGGAAATGATCCTCATCAACTACATGGGAGGAAAAGTAAGAAACATGGAAGGTGCACTTTATTGGTTCGTAATTCCAACATAGGGTCAAATTCAGATTCTGATGACTATGTTCCATATATGGGCAAACGAACGGTGCTTTCCTGGTTGGTTGACTCTGGAGCTGTACAGTTAAGCCAAAAGGTTCAGTATCGTAGAAGGAAACGTGTAATGCAGGAGGGATGGGTCACCAGGGATGGGATTCATTGTAGTTGCTGTAGTAAAATACTCACTGTTTCCAAGTTTGGGCTTCATGCAGGAAGTAAATTGCGCCAGCCATATCAAAACATATATTTGGATTCTGGAGATTCTCTTCTACAGTGCCAGATAGATGCATGGAATAAACAAGAGAATTCTGAGAAAATTGCTTTCCATGCAGTAGATATTGATGGTAATGATCCAAATGATGATACTTGTGGTATATGTGGAGATGGAGGGGATTTGATCTGTTGTGATGGTTGTCCATCAACGTTTCATCTGAGTTGCTTGAATATACAGATGCTCCCCCCTGGTGAATGGCATTGTCCAAATTGCACATGCAAATTTTGTGGAGTAGTCCGTGGTCCTGTAAACAAAGAAGATGAATCAACTTTAAATGCCCTACATAGATGCAACTTATGCGATAAAAAATTTCATGAATGTTGTGCTAAGGAGATGAAAACCCTTCCTACTAACTCCGATATGTCAAGCCCTTCCTTTTGCGGAAGGGACTGCAAAGAGCTTTCTGAGCACTTGAAGAAATACCTTGGTACTAGGCATGAAATAGATGGAGGCTTCACATGGTCTCTCATTCATAGAACAGAAGACGACTCAGAGGCATCTAGTAGGGGAATTATGCAGAGGGTTGAATGGAACTCCAAGTTAGCTGTTGCACTGACTGTGATGAATGAATGCTTTTTGCCAGTTATTGATAGGAGAAGTGGGGTCAATTTAATACATAATGTTTTATATAATAGTGGGTCAAACTTCAGCCGGTTGAATTACACTGGCTTTTATACTGCGATTTTGGAGCAAGGCGATGAAATAATTTCTGCAGCTTCTATCAGGTTCCATGGGACCAAGTTAGCAGAGATGCCATTCATTGGAACTCGCCATATGTATAGGCATCAGGGGATGTTGCGCAGGCTTTTTTCTGCCATTGAATTGGTAAACATGAAAATTTCTGTGATTTTCCTTTTATCCAATGTCTATACAAAAGTTTGACTTACATTCTTCTTTTCCCTTGGCTTCATGCATCTTGAGGAATCACTCAGACAGGAAATGAGGTCATTGAATATGTTGGTCTTCCCCGGTATAGATATGTTGGAGAAAGTGCTAACCAAACAAGGAAAACTTGATGGTGTTGAGAAAATGGAAACTAGAGATGAATTTGTTACTATGCCTAATATGGCTGGTAAGTTGGATATGAATTCCTCAGCTCTGGAAGATCCTGAACGGAGTGATCATGCTAATTCAAATCCTGACAATGAGATAAACGACGACTCTAGTGATGCTTCTCAAGAACAGGATAATCACATTTTGGTTGACAGCACCAAGTCTCATTCTGCAGATAGATCATCTGATTTTGTTTCAAATAAATGTGTTTCTCCTTCTAGTACCAGGGATGATGTGCTAGAAACAAACAATAAAGCAGTGACAGCTTTTCCTGGTAATAATAAATTGCATCCCTCTGTGAAATGTCAAAATCACACTTCTTTGAGCAGTCCTCCATTAGTTTCTCCATCTCCAGATTGCCATGAACTTGCTGCTTTGCATTCGGTGAGTGTATGTTCGGACCCTGATTCTGCGAAAAATCTGGCACAACCTGTTTCTGATGGGAAATGTCACATGCACACTGATGACGTTAATCCAGGGTTGGATTCTCAAGTGGGAGATAATGCTTTGTCTTCTAAAGAGGTTGATATGAATGATGCCCGTGATGAGGTTCTTGAATCAGTGAATTTATCTCAGGGTAAAATTACGAAGGAGAAAAATGAAGTTGTGGATGTCTCTGGTTCTGTTCCCAATCATGCTGATGAGAGTTCTTTGCAAGTGAAATCTGATTTGATGGATGAAATTGTATTGGAGGGAGAAAAGAATTTGGACAAAGAGGTTGCATCACGTGAAATGTGTGTGGATGAAACTGGCCTAAGGGCATCTGGTGCTAGTTCTTAA 3891 0.421 MEPGMRSDGPSGALVKNRRSSGCLVVRKKGDGLSGGVGSSFSSRKLNASKKGKKRPKVELSSSDSESSQELLMPSSRGLGPETIRVCNGLTAVKRDEAGDGGTGRKRERFEDISHNGDEMGEGNGSERREKKLSKIDVFDFDEYDAMDADMMRRSHVDSNGGGFGGERLGGAMHAARGGTDREFKTGSSRHTLNKRKNSHCDKASHLHPRDSKLKKWDAAQHPQPVPKEKFNSDESIRVQGKNGVLKVMVNKKMCKPSKHVDNRKHVEGQRSLRAEGIAKKNVLIHPSSCLEKKPVKKQGLHARTEKKLVARRKSLSSNDTKGDDQDSDNSGTSLNVGVKCIKAFKSLKRGTSDDEQTPKHEKTPTTAGTKKEKIRRGSGTEKQKLREQIREMLLNAGWTIDYRPRRKRDYLDAVYINPGGTAYWSIIKAYEAFQKQLSADDPGAKPNGECSSFARITDDVLSQLTRNTQKKMERELKKKKKKKQKKERDDSESDSGKEPRIKRSLSNKRDMNGMESDSDEEKLSSFLKRERKSMKNKMIENTVNSCRSTSKKADLHTDEGTEKSLLGNDPHQLHGRKSKKHGRCTLLVRNSNIGSNSDSDDYVPYMGKRTVLSWLVDSGAVQLSQKVQYRRRKRVMQEGWVTRDGIHCSCCSKILTVSKFGLHAGSKLRQPYQNIYLDSGDSLLQCQIDAWNKQENSEKIAFHAVDIDGNDPNDDTCGICGDGGDLICCDGCPSTFHLSCLNIQMLPPGEWHCPNCTCKFCGVVRGPVNKEDESTLNALHRCNLCDKKFHECCAKEMKTLPTNSDMSSPSFCGRDCKELSEHLKKYLGTRHEIDGGFTWSLIHRTEDDSEASSRGIMQRVEWNSKLAVALTVMNECFLPVIDRRSGVNLIHNVLYNSGSNFSRLNYTGFYTAILEQGDEIISAASIRFHGTKLAEMPFIGTRHMYRHQGMLRRLFSAIELVNMXKISVIFLLSNVYTKVXLTFFFSLGFMHLEESLRQEMRSLNMLVFPGIDMLEKVLTKQGKLDGVEKMETRDEFVTMPNMAGKLDMNSSALEDPERSDHANSNPDNEINDDSSDASQEQDNHILVDSTKSHSADRSSDFVSNKCVSPSSTRDDVLETNNKAVTAFPGNNKLHPSVKCQNHTSLSSPPLVSPSPDCHELAALHSVSVCSDPDSAKNLAQPVSDGKCHMHTDDVNPGLDSQVGDNALSSKEVDMNDARDEVLESVNLSQGKITKEKNEVVDVSGSVPNHADESSLQVKSDLMDEIVLEGEKNLDKEVASREMCVDETGLRASGASS 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03293 1297 MobiDBLite consensus disorder prediction 1 133 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 350 383 - -
Arst9g03293 1297 ProSitePatterns Zinc finger PHD-type signature. 718 757 IPR019786 -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 486 528 - -
Arst9g03293 1297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 707 834 IPR013083 -
Arst9g03293 1297 CDD PHD2_CHD_II 718 757 - -
Arst9g03293 1297 Pfam Tify domain binding domain 640 690 IPR032308 -
Arst9g03293 1297 Coils Coil 470 490 - -
Arst9g03293 1297 ProSiteProfiles Zinc finger PHD-type profile. 715 760 IPR019787 -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 552 574 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 154 230 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 1052 1068 - -
Arst9g03293 1297 SMART PHD_3 717 758 IPR001965 -
Arst9g03293 1297 SMART PHD_3 759 818 IPR001965 -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 1040 1115 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 198 218 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 465 528 - -
Arst9g03293 1297 Pfam PHD-finger 718 760 IPR019787 -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 289 333 - -
Arst9g03293 1297 PANTHER PHD FINGER PROTEIN 12 332 1169 IPR042163 GO:0003714|GO:0045892
Arst9g03293 1297 SUPERFAMILY FYVE/PHD zinc finger 707 766 IPR011011 -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 291 327 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 547 579 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 98 133 - -
Arst9g03293 1297 MobiDBLite consensus disorder prediction 1097 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03293 Arst-Chr9 110282648 110289299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03293 1 1019 PHD Transcription Factor Family AT4G14920 46.250 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Arst9g03293 TDBD 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03293 - - mtr:25485216 1422.91