Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03261 ATGGACACTCCCGACAGGGCCACCACCACCAACAACCTCAATCCCCCCAAATTTGAGGATTCACCGGTATTTAACTTTCTCAATAGTCTATCTCCTATAAAGCCAGTTAAATCTGTTCACATTACCCAGACCTTCAGTTCAATTAGCTTTTCATCCCCTCCATCGGTTTTCACATCACCCCATGTCAACTCTAACAAGGAATCCAGATTCCTGAGGAGGCATAACCTTTTAGACACATCAAAGCCAAAGGTTACATCTGAGGATGAAAATCAAACTGGTTCAGCTGAACAGGCTCTTACAGATTCAACTCATGCACATAATAACTCAAGGGAGTTAGAGAAAAATGCTGATAAAGGAACTTCCATAGGGGATGCCTCAATTGAGCCAGCCAGTGAACAAGCAAAGTTCTCAATCGAGCTGCCACAGACCTTAAAATATGAGTCTGGTAGCCCTGGATATGATCCTATACTTTGTGGTGATGAGGCTAATACACTTCTGTCATTGCCTTCTTCTGAGGCAGCACAAGATGTTGCCTGCAGTCATGAATCCTCTAAAAAGAATTTGGTGGAGGGTGAACTGCATCTCCACGGAATATGTCAGACTGAGCCGAAAATTGATGGCACCGAGTGTGATTGGGATAATTTAATTAATAATGCATCTGATATGTTAATTTTTAGTTCGCCAAATGTCTCAGAAGCTTTTAAGGATCTAATGAATAAACAATTGGACCCTTCCGGACGTATAATGCAAATTGTCAATCAAGTTGCTTCTGGATCAGGACATGAAAATGAAGATCATCCTCCCAAACCAGGACTAGCTTCAGACACACAATACACACAGGAAAATATTGCTAATGTTGCTTTGGTGGCTAGCAATCCATGTGAGAAAATGGATGATGAGCATGTTTATGTTATACACCGTGGTATACGGAGGCGCTGTCTAGACTTTGAGATGGCCAGCGTTCGCAGAAATAACTCAGACGGCAATTCAAATGCAAGTTCCAATGCAACAAAGTCTGATGAGAGGAATACTGGTGGTGATTCAAGGAGGTGCTTTTTGCCGGGAATTGGTTTACACTTGAATGCGCTTGCAACTTTGAAGGAGCACCGTGGCATGAAAAATGAAAAGTCTTCTTCTGGAAGACAGCTTAACATTCCCAGCTCCACTTCTTCCTTGTTACCGCAAGAACATCATCTGTTATTGCTACCTGCATCCTCTGAAAGAGATATGGAGCTGCCAGAGAATGAGGTTCAGCCTGTCGACGATTGTAGTCAGTCATTATCTCTCATGGCCGGTGAAGAATTCAATCAGAATAGCCCCAAAAAGAAAAGGCGGAAGGTGGAAACAGCTGGAGAAAGTGAGTCTTGCAAACGGTGTAATTGTAAGAAATCAAAATGTTTGAAGCTTTATTGCGAGTGCTTTGCTGCTGGAGTCTACTGTATAGAACCTTGCTCTTGTCAAGACTGCTTCAATAAACCTGTTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAGTCACGTAACCCGCTTGCATTTGCTCCCAAAGTCATCAGGAGTTCTGATTCTGTTTCTGAAATTGCGGATGATCCAAACAAAACTCCAGCTTCGGCACGACACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGTATTTTCCGTTTCTATATCATTTGTGCCTTCTATTTCAGTTATAATACGAGTTAAATGTTGGTTTCTTTCAAAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGCTGCAAGAACGCATTCGGTAGAAAGGATGGTTCTGCAGGAATAGATGCTGAGGCAGAAGAAGAGACAGAAGCATCGGAAAAGGGCGAGGTGGAAAAGGCTTTGCAGAAAACTGAAATTCAGAATATTGAAGAAAATCAGAATTCTGCTCTTCAAGCAACACCATTACGGCTTTCCAGACCATTGCTTCCATTGCCCTTTTCATCGAAGGGAAAGCCGCCTAGATCTTTTATTGCTACGATCTCTGGTTCTGCATTGATTGCCAGCCAAAAGCTTGGTAAACCAAATATTCTTCGGCCTCAAGTTAAGTTAGAAAAGCCTCATCAAACTGTAGCAGATGATGAAATGATGGACATTATCCAAGGTGATAGCTCTCCTATCGCTTGCATAAAAACCTCTTCTCCCAATGGCAAAAGGATTTCCTCTCCTAATTGTGAACTTGGATCATCTCCAACTCGCAGAGGTGGCAGGAAGTTGATATTACACTCCATCCCTTCGTTTCCTTCCCTCACCCATCACCATTAG 2319 0.4243 MDTPDRATTTNNLNPPKFEDSPVFNFLNSLSPIKPVKSVHITQTFSSISFSSPPSVFTSPHVNSNKESRFLRRHNLLDTSKPKVTSEDENQTGSAEQALTDSTHAHNNSRELEKNADKGTSIGDASIEPASEQAKFSIELPQTLKYESGSPGYDPILCGDEANTLLSLPSSEAAQDVACSHESSKKNLVEGELHLHGICQTEPKIDGTECDWDNLINNASDMLIFSSPNVSEAFKDLMNKQLDPSGRIMQIVNQVASGSGHENEDHPPKPGLASDTQYTQENIANVALVASNPCEKMDDEHVYVIHRGIRRRCLDFEMASVRRNNSDGNSNASSNATKSDERNTGGDSRRCFLPGIGLHLNALATLKEHRGMKNEKSSSGRQLNIPSSTSSLLPQEHHLLLLPASSERDMELPENEVQPVDDCSQSLSLMAGEEFNQNSPKKKRRKVETAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPVHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVSEIADDPNKTPASARHKRGCNCKKSSCLKKYCECYQVFSVSISFVPSISVIIRVKCWFLSKGGVGCSISCRCEGCKNAFGRKDGSAGIDAEAEEETEASEKGEVEKALQKTEIQNIEENQNSALQATPLRLSRPLLPLPFSSKGKPPRSFIATISGSALIASQKLGKPNILRPQVKLEKPHQTVADDEMMDIIQGDSSPIACIKTSSPNGKRISSPNCELGSSPTRRGGRKLILHSIPSFPSLTHHH 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03261 772 MobiDBLite consensus disorder prediction 322 350 - -
Arst9g03261 772 MobiDBLite consensus disorder prediction 49 65 - -
Arst9g03261 772 SMART CXC_2 540 606 IPR033467 -
Arst9g03261 772 SMART CXC_2 454 495 IPR033467 -
Arst9g03261 772 MobiDBLite consensus disorder prediction 49 124 - -
Arst9g03261 772 MobiDBLite consensus disorder prediction 66 85 - -
Arst9g03261 772 MobiDBLite consensus disorder prediction 86 105 - -
Arst9g03261 772 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 457 492 IPR005172 -
Arst9g03261 772 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 543 561 IPR005172 -
Arst9g03261 772 ProSiteProfiles CRC domain profile. 455 605 IPR005172 -
Arst9g03261 772 MobiDBLite consensus disorder prediction 1 21 - -
Arst9g03261 772 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 561 IPR044522 GO:0003700
Arst9g03261 772 MobiDBLite consensus disorder prediction 731 747 - -
Arst9g03261 772 MobiDBLite consensus disorder prediction 256 275 - -
Arst9g03261 772 MobiDBLite consensus disorder prediction 322 341 - -
Arst9g03261 772 MobiDBLite consensus disorder prediction 370 389 - -
Arst9g03261 772 MobiDBLite consensus disorder prediction 731 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03261 Arst-Chr9 110077064 110081696 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03261 18 772 CPP Transcription Factor Family AT4G14770 44.114 1.27e-162 484
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst9g03261 TCR 1.4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03261 - - adu:107467046 1486.47