Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03260 ATGGACACTCCCGACAGGGCCACCACCACCAACAACCTCAATCCCCCCAAATTTGAGGATTCACCGGTATTTAACTTTCTCAATAGTCTATCTCCTATAAAGCCAGTTAAATCTGTTCACATTACCCAGACCTTCAGTTCAATTAGCTTTTCATCCCCTCCATCGGTTTTCACATCACCCCATGTCAACTCTAACAAGGAATCCAGATTCCTGAGGAGGCATAACCTTTTAGACACATCAAAGCCAAAGGTTACATCTGAGGATGAAAATCAAACTGGTTCAGCTGAACAGGCTCTTACAGATTCAACTCATGCACATAATAACTCAAGGGAGTTAGAGAAAAATGCTGATAAAGGAACTTCCATAGGGGATGCCTCAATTGAGCCAGCCAGTGAACAAGCAAAGTTCTCAATCGAGCTGCCACAGACCTTAAAATATGAGTCTGGTAGCCCTGGATATGATCCTATACTTTGTGGTGATGAGGCTAATACACTTCTGTCATTGCCTTCTTCTGAGGCAGCACAAGATGTTGCCTGCAGTCATGAATCCTCTAAAAAGAATTTGGTGGAGGGTGAACTGCATCTCCACGGAATATGTCAGACTGAGCCGAAAATTGATGGCACCGAGTGTGATTGGGATAATTTAATTAATAATGCATCTGATATGTTAATTTTTAGTTCGCCAAATGTCTCAGAAGCTTTTAAGGATCTAATGAATAAACAATTGGACCCTTCCGGACGTATAATGCAAATTGTCAATCAAGTTGCTTCTGGATCAGGACATGAAAATGAAGATCATCCTCCCAAACCAGGACTAGCTTCAGACACACAATACACACAGGAAAATATTGCTAATGTTGCTTTGGTGGCTAGCAATCCATGTGAGAAAATGGATGATGAGCATGTTTATGTTATACACCGTGGTATACGGAGGCGCTGTCTAGACTTTGAGATGGCCAGCGTTCGCAGAAATAACTCAGACGGCAATTCAAATGCAAGTTCCAATGCAACAAAGTCTGATGAGAGGAATACTGGTGGTGATTCAAGGAGGTGCTTTTTGCCGGGAATTGGTTTACACTTGAATGCGCTTGCAACTTTGAAGGAGCACCGTGGCATGAAAAATGAAAAGTCTTCTTCTGGAAGACAGCTTAACATTCCCAGCTCCACTTCTTCCTTGTTACCGCAAGAACATCATCTGTTATTGCTACCTGCATCCTCTGAAAGAGATATGGAGCTGCCAGAGAATGAGGTTCAGCCTGTCGACGATTGTAGTCAGTCATTATCTCTCATGGCCGGTGAAGAATTCAATCAGAATAGCCCCAAAAAGAAAAGGCGGAAGGTGGAAACAGCTGGAGAAAGTGAGTCTTGCAAACGGTGTAATTGTAAGAAATCAAAATGTTTGAAGCTTTATTGCGAGTGCTTTGCTGCTGGAGTCTACTGTATAGAACCTTGCTCTTGTCAAGACTGCTTCAATAAACCTGTTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGAGTCACGTAACCCGCTTGCATTTGCTCCCAAAGTCATCAGGAGTTCTGATTCTGTTTCTGAAATTGCGGATGATCCAAACAAAACTCCAGCTTCGGCACGACACAAAAGAGGATGTAATTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATTAGCTGTAGATGTGAAGGCTGCAAGAACGCATTCGGTAGAAAGGATGGTTCTGCAGGAATAGATGCTGAGGCAGAAGAAGAGACAGAAGCATCGGAAAAGGGCGAGGTGGAAAAGGCTTTGCAGAAAACTGAAATTCAGAATATTGAAGAAAATCAGAATTCTGCTCTTCAAGCAACACCATTACGGCTTTCCAGACCATTGCTTCCATTGCCCTTTTCATCGAAGGGAAAGCCGCCTAGATCTTTTATTGCTACGATCTCTGGTTCTGCATTGATTGCCAGCCAAAAGCTTGGTAAACCAAATATTCTTCGGCCTCAAGTTAAGTTAGAAAAGCCTCATCAAACTGTAGCAGATGATGAAATGATGGACATTATCCAAGGTGATAGCTCTCCTATCGCTTGCATAAAAACCTCTTCTCCCAATGGCAAAAGGATTTCCTCTCCTAATTGTGAACTTGGATCATCTCCAACTCGCAGAGGTGGCAGGAAGTTGATATTACACTCCATCCCTTCGTTTCCTTCCCTCACCCATCACCATTAG 2244 0.4287 MDTPDRATTTNNLNPPKFEDSPVFNFLNSLSPIKPVKSVHITQTFSSISFSSPPSVFTSPHVNSNKESRFLRRHNLLDTSKPKVTSEDENQTGSAEQALTDSTHAHNNSRELEKNADKGTSIGDASIEPASEQAKFSIELPQTLKYESGSPGYDPILCGDEANTLLSLPSSEAAQDVACSHESSKKNLVEGELHLHGICQTEPKIDGTECDWDNLINNASDMLIFSSPNVSEAFKDLMNKQLDPSGRIMQIVNQVASGSGHENEDHPPKPGLASDTQYTQENIANVALVASNPCEKMDDEHVYVIHRGIRRRCLDFEMASVRRNNSDGNSNASSNATKSDERNTGGDSRRCFLPGIGLHLNALATLKEHRGMKNEKSSSGRQLNIPSSTSSLLPQEHHLLLLPASSERDMELPENEVQPVDDCSQSLSLMAGEEFNQNSPKKKRRKVETAGESESCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNKPVHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVSEIADDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAGIDAEAEEETEASEKGEVEKALQKTEIQNIEENQNSALQATPLRLSRPLLPLPFSSKGKPPRSFIATISGSALIASQKLGKPNILRPQVKLEKPHQTVADDEMMDIIQGDSSPIACIKTSSPNGKRISSPNCELGSSPTRRGGRKLILHSIPSFPSLTHHH 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03260 747 SMART CXC_2 540 581 IPR033467 -
Arst9g03260 747 SMART CXC_2 454 495 IPR033467 -
Arst9g03260 747 MobiDBLite consensus disorder prediction 49 65 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 322 350 - -
Arst9g03260 747 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 543 578 IPR005172 -
Arst9g03260 747 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 457 492 IPR005172 -
Arst9g03260 747 MobiDBLite consensus disorder prediction 66 85 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 49 124 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 706 722 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 86 105 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 1 21 - -
Arst9g03260 747 ProSiteProfiles CRC domain profile. 455 580 IPR005172 -
Arst9g03260 747 MobiDBLite consensus disorder prediction 706 729 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 256 275 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 322 341 - -
Arst9g03260 747 MobiDBLite consensus disorder prediction 370 389 - -
Arst9g03260 747 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 744 IPR044522 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03260 Arst-Chr9 110077064 110081696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03260 18 747 CPP Transcription Factor Family AT4G14770 45.588 2.07e-168 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Arst9g03260 TCR 1.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03260 - - adu:107467046 1437.94