Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03258 ATGGCAGTTGGGAAGAACAAGAGGATCTCCAAGGGAAAGAAGGGTGGAAAGAAGAAGGCTGCTGATCCGTTTGCAAAGAAGGATTGGTATGACATTAAGGCCCCTTCCGTTTTCCAGGTCAAGAATGTTGGCAAGACCCTTGTGACTCGTACACAGGGTACGAAGATCGCATCCGAAGGGCTCAAACATAGGGTGTTTGATGTCTCATTGGCTGATCTTCAAGGGGATGAGGACCATTCATTCAGGAAGATTAGATTGAGAGCTGAAGATGTTCAAGGGAGGAATGTTCTGACCAACTTCTGGGGAATGGATTTTACGACTGACAAGTTGAGGTCGTTGGTTCGAAAATGGCAAACACTCATTGAAGCCCATGTTGATATCAAAACAACCGACAACTACACATTGAGGTTGTTTTGCATTGGTTTCACCAAAAGGAGGTTCAACCAAATTAAGAGGACTTGTTATGCGCAAACAAGTCAAGTAAGACAGATCCGTAGGAAGATGAGAGAGATAATGACAAACCAGGCTACATCCTGTGATTTGAAGGAGTTGGTCCGCAAGTTCATTCCTGAAATGATAGGAAAGGAGATCGAGAAGGCAACATCCAGTATTTATCCGCTCCAAAATGTTTTTATCAGAAAAGTCAAGGTCTTGAAGGCTCCCAAGTTTGATCTTGGAAAACTGATGGAGGTCCATGGTGACTACTCTGAAGATGTTGGTGCAAAGGTAGACAGACCTGCTGATGAAACAATGGCAGAGGCACCCACTGAAGTTATTGGAGCTTGA 786 0.4427 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFDVSLADLQGDEDHSFRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDIKTTDNYTLRLFCIGFTKRRFNQIKRTCYAQTSQVRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKVLKAPKFDLGKLMEVHGDYSEDVGAKVDRPADETMAEAPTEVIGA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03258 261 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Arst9g03258 261 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Arst9g03258 261 MobiDBLite consensus disorder prediction 1 15 - -
Arst9g03258 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 258 IPR027500 GO:0003735|GO:0005840|GO:0006412
Arst9g03258 261 MobiDBLite consensus disorder prediction 1 20 - -
Arst9g03258 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03258 Arst-Chr9 110058071 110060289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03258 1 261 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 83.969 2.51e-162 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03258 K02984 - gmx:100818730 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03258 9 110058071 110060289 Arst9g03258 9 110058071 110060289 ECH