Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03239 ATGGAGCAACACTGTTGTTACTGCTTCGACTGCCTCCAGCTTCGAATCAACTCCGATTTCTCCGACCAACTCTTGTTCAATTATGGCATTTCCTCTTCCCCTTTCCCTTTCGGTTCTTCCGCCGTTGTCCAAATTTCTGGTACAGCTGGCAGTGAAGCTTCATCCGGTCAATTTATATTGCAGTACACGCGCTCTCGTCACAGCAATTGTTTCTCCAATTATGTAAATGAGTATATTTTGGATAGTAATGAAGGAACTAGGAGTAGTGATCCTGATACTGGCACAAGCCAATGTGGTCCTAATGTGCAAAATGGTGGAATGGCTTCATCATCAGATGCTGAAACCAAAAGAGCATCTCCCATGAGCACAAGTTGTAGTCATTCTGGAAAGTTTTCTTGCTTCAGGATAATCACTTCACTGGCCCCCATTGCCCGAGTGGGAGTTTCTTCATTTTCTACCATCCAAGAGGTTGCCACTGATTTCTTGTCTGGGTTAATGGAAGATCATGTGTTGGATTCACTTGATATCTGGATTGAAGGGAAAGCTTCAGGAAGGGACAGCACAAATTTCCTTAGCTTAATTGGCTTGCCATCGTTTCAGGAGGACACATTTCCCGGCTCCTTGAGGCATCCAAACATAGCCCCTGTCCTTGCATTTTTTAAATCATCTGATCATGTTAATATGGTGCTTCCAAAGACTCCATACAATCTCGAGAATATTCTGCATTTTAACCCCAGTGCCTTTAAGTCTGACTGGCATAGAGGATTTCTTATATATCAGCTGCTCTCAGCATTGGTATACCTTCACGGTCTAGGGGTTTCTCATGGCAACGTATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCTACATTGGAATTTAATTCAACTTTACAAAAGAGTGAAGACGTTAATTCAAGCCCTGCAAAAATTAGTTGTTACAATAGTGGTTGCCATTATAATGGTCTTTATGCTGATTTAAAGCTTTCACCATCAATAGATTGGCATTCTAGCTTCCATCATTGGTGGAAAGGAGAGTTGAGTAATTTTGAATATTTACTTATCTTAAACAGATTAGCAGGCAGAAGGTGGGGAGACCATACATTTCATCCAGTAATGCCTTGGGTAATTGATTTTAGCACCAAACCTGATGATAATTGTGATGCAGGATGGCGAGACTTGAGCAAGAGCAAATGGCGCTTAGCGAAAGGTGATGAACAGTTGGATTTCACCTATTCAACATCTGAAATACCTCATCATGTGTCAGATGAATGCCTCTCTGAACTGGCTGTGTGCAGTTATAAAGCAAGAAGGCTGCCTTTGAGTGTACTCCGAATGGCTGTTCGTTCAGTTTATGAACCTAACGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCAGATGAGTGCATTCCAGAGTTCTATTGTGATGCCCAAATATTTAGATCAATTCATGATGGAATGGCTGATTTGGCTGTACCTTCTTGGGCTGAGACTCCAGAGGATTTCATTAAATTGCATCGTTGGGCATTAGAAAGTAATAGAGTTTCTTTTCAACTCCATCAATGGATAGATATAACCTTTGGGTACAAAATGTCTGGGCAAGCAGCTATTGCTGCTAAGAATGTTATGCTTCCTATATCAGAACCTACGATGCCAAGGTCAACAGGACGTCGTCAGCTCTTTACACGACCTCACCCCATTCGTCTTGCCACTTCAACCGCACGTCGTTATGCCACCAATAAATATGCTAAAGTTTGGAGCCAGGAAAATGAAATACTGCGAGAGACATCTCTCCTGTCTGATGCTGCTTATCTACAAGAACTAGAGCAAGCATCTGCATTTTCTGAGCATGCTAGGCATTTGAATTCTTGTTATCAGTGTCCATTAAATCAAACACAGGGAGATCCAACAAGGCAGTCAATTAACAAAAGCATATGCAAATTATCTTTGCCTGACAGAAACTACTTGCTGCCATATAAAATGAATCTGATTTCTTTGATTCAGCATATGAAGGAAGAAGATGACAGCTCGTCAGGATATCCAGACTATTTGCTTTGGAGGGAAAAATTGTCTTGCTCAAAAGTTAGCTCTGAAGATGTTGCTAGGGACATTTTTTCTGTTGGTTGTCTCTTAGCAGAACTTCATCTTTCTATTCCCCTCTTTGATTCAACCTCATATGCGATGTACTTGGAAGATGGGACCTTACCAGGATCTCTTTGTGAACTTCCTCCTTATGTTAGGTTACTTGTTGAAGCATGCATACAAAAGGATTGGATGAGGAGGCCTTCAGCCAAATTTCTTCTGGAATCACCTTATTTTCCAAAGACAATAAAGTCCTCCTACACGTTTCTTGCCCCACTTCAGCTTGTTGCTAAGGATGAGACCCGCCTTCGATATGCCACAAATCTTGCAAAGAAGGGAGCTCTCAGAGAAATGGGCTCATTCGCAGCTGAAATGTGCGCTACTTATTGCTTACCACTTGTATTGAGTACTGTGAATGATGCTGAAGCTGAATGGGCATATATACTACTGAAAGAATTTATGAGATGCTTAAAAGAGAAAGCAGTGAAGAAATTAATCTTGCCAACCATACAGAAAATTTTGCAGACAACAGGTCATTTACATTTAAAAGTTTCCCTTTTACAAGATTCATTTGTACGTGAAATATGGAACCGAGTTGGTAAACAAGTATACCTGGAAACTATTCACCCATTGGTTTTATCAAACTTGTATAATTCTCTGGATAAAAGTTCAGCTGCATCTGCATCTGTCCTTCTAGTTGGTTCTAGTGAGGAGCTTGGAGTACCTATTACCATCCACCAGACAATCTTGCCTCTTTTTTACTGTTTTGGTAAAGGACTTTGTGCTGATGGCATTGATGTGCTGGTCAGACTTGGTGGCATTTTTGGAGAATCCTTTATTGTGAAACAGATGCTACCATTACTAAAAAATGTTGTTCGCTCGTTCGTTGATATGTCAAGCATGAACAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCGTGATGACATTAGATGGCCTTTTACCTTACTTGACAGAAGAGATTATTGTAAAGGAGCTGTTTGAAGACCAAAATTGTGTACTCATCAGGGTTCTTATGCAGAAACATATGGACATTGCCGTGCTTCAGGTTGCTGCTACTACTCTCTTTGCAATATGTCAGCGAATTGGGGCAGATTTGACAGTATTGCATATTCTACCAAAGCTTAAAGAACTATTTGATGAGCTTGCTTTCCAGCAACTTTCTAAGGATTCAACTACTGTTACCAGAAATTTGAAGGTTGCCAAACTAAAAATTAGTGGGGACTTGCAAATTGAAAGCCGAATGGATCTAGTGTTGGTTCTCTATCCTTCGTTTGCCTCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTACAACTTGAACAATTTCTTCTACGCCAGCATAATTGGAAGTGGGAATGTGCAGGAGAATCATCAAAAGGTAGTTCAGAAAATTTTATTGGTAGAAGATCCACATTTGGCCAGGGTTCCACCTCTGAATACACTCCGGCAAAGCTGTTGCTTAATGGCGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCTAAGAACTTGATTCCTCAGAGACAATATTTTAAACGCAGTCAGAGTCAAGTAGCAACGCAAGAAGACACACCATACCAATTTAACCAAGAACCCTGGTTTTGGTTCCCCAGCCCCGCCACCGTATGGGATGGACCTGAATTTCTTGGGCGGGTGGGGGTTCAGAAAGATGACCTTCCATGGAAGATCAGAGCATCTGTTATATACTCTATACGTGCAAATCATGGAGCAGTGAGGTCTCTAGCTGTTGATCAAGATGAAAGTACTGTTTTCACTGCAGGAATTGGTCAAGGGTATAAAGGAACTATTCAAAAGTGGGAACTAAGCCGAACTAACTGTCTTTCTGGCTATTATGGACATGAGGAGGTTGTGAACAATATTTGCATCTTATCATCTAGTGGAAGAGTGGCGTCTTGTGATGGAACAGTTCATATTTGGAATAGTCAAACAGGGAAGCAAATATCAGTATTTGAAGAGTCCCAAACAGATCCTGCCCATACTACAAGTGATCTATCCGCCGCATCAAAAATTAACATTGACCAGGCAAACATGCTCAATTTGAATACACTGTCAAATGGAATATTGTCTAGTACATTTGATTCAAGCCTTTATACTTGCATGCATCTATTAGACGCGGCTGAAACACTTGCGGTTGGCACTGGAAATGGTTCACTCAGGTTTATTGATGTTGCTCGAGGCCAAAAGCTTCATATGTGGAGAGGAGAATCTAACGAATCTAGTTTCCCTTCTCTTATTTCTTCCATTTGTTCCTCTGGATCTGACAGGATGCATGCAGGTGGAATTTCCACTTTGCCATCTTTTATTGCAGCTGGACTAAGTTCTGGTCATTGTAAATTATTTGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTAACAAAATTGGCAGCACCCGAGGATCACATGCTCGTATCCAGCTCTCTTGACAGAACTTTAAGAGTCTGGGATTTAAGAATGAATTTGCCATCGCAGCCCATTATTTTCAGAGGTCCTTCAGATGGCATATCCAGTTTCGCCATATGGGGCCAAGATGTTATTTCGATTTCCCGGAATAGGATTGGCCTTCTCTCCTTGCCTAAATCTGCCAATGAAATAGATGGACAGCATCATATCATTCCCCAGAAGCTCTATGTTTCAGATAACAATGGAATGAGGAGCTTGTCAGCATTATCAAGTATTAGTATACTTCCATTCTCTCGATTGTTTCTCATTGGGACAGAAGATGGTTATTTGAGAATCTGTTGTTAA 4962 0.4119 MEQHCCYCFDCLQLRINSDFSDQLLFNYGISSSPFPFGSSAVVQISGTAGSEASSGQFILQYTRSRHSNCFSNYVNEYILDSNEGTRSSDPDTGTSQCGPNVQNGGMASSSDAETKRASPMSTSCSHSGKFSCFRIITSLAPIARVGVSSFSTIQEVATDFLSGLMEDHVLDSLDIWIEGKASGRDSTNFLSLIGLPSFQEDTFPGSLRHPNIAPVLAFFKSSDHVNMVLPKTPYNLENILHFNPSAFKSDWHRGFLIYQLLSALVYLHGLGVSHGNVCPSNIMLTDSLWSWLRLWNEPTLEFNSTLQKSEDVNSSPAKISCYNSGCHYNGLYADLKLSPSIDWHSSFHHWWKGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSTKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDAQIFRSIHDGMADLAVPSWAETPEDFIKLHRWALESNRVSFQLHQWIDITFGYKMSGQAAIAAKNVMLPISEPTMPRSTGRRQLFTRPHPIRLATSTARRYATNKYAKVWSQENEILRETSLLSDAAYLQELEQASAFSEHARHLNSCYQCPLNQTQGDPTRQSINKSICKLSLPDRNYLLPYKMNLISLIQHMKEEDDSSSGYPDYLLWREKLSCSKVSSEDVARDIFSVGCLLAELHLSIPLFDSTSYAMYLEDGTLPGSLCELPPYVRLLVEACIQKDWMRRPSAKFLLESPYFPKTIKSSYTFLAPLQLVAKDETRLRYATNLAKKGALREMGSFAAEMCATYCLPLVLSTVNDAEAEWAYILLKEFMRCLKEKAVKKLILPTIQKILQTTGHLHLKVSLLQDSFVREIWNRVGKQVYLETIHPLVLSNLYNSLDKSSAASASVLLVGSSEELGVPITIHQTILPLFYCFGKGLCADGIDVLVRLGGIFGESFIVKQMLPLLKNVVRSFVDMSSMNKPDPVQSWSALALIDCVMTLDGLLPYLTEEIIVKELFEDQNCVLIRVLMQKHMDIAVLQVAATTLFAICQRIGADLTVLHILPKLKELFDELAFQQLSKDSTTVTRNLKVAKLKISGDLQIESRMDLVLVLYPSFASLLGIEKLRQCCATWLQLEQFLLRQHNWKWECAGESSKGSSENFIGRRSTFGQGSTSEYTPAKLLLNGVGWSIPQSQGSRSAKNLIPQRQYFKRSQSQVATQEDTPYQFNQEPWFWFPSPATVWDGPEFLGRVGVQKDDLPWKIRASVIYSIRANHGAVRSLAVDQDESTVFTAGIGQGYKGTIQKWELSRTNCLSGYYGHEEVVNNICILSSSGRVASCDGTVHIWNSQTGKQISVFEESQTDPAHTTSDLSAASKINIDQANMLNLNTLSNGILSSTFDSSLYTCMHLLDAAETLAVGTGNGSLRFIDVARGQKLHMWRGESNESSFPSLISSICSSGSDRMHAGGISTLPSFIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEDHMLVSSSLDRTLRVWDLRMNLPSQPIIFRGPSDGISSFAIWGQDVISISRNRIGLLSLPKSANEIDGQHHIIPQKLYVSDNNGMRSLSALSSISILPFSRLFLIGTEDGYLRICC 1653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03239 1653 CDD Beach 351 580 IPR000409 -
Arst9g03239 1653 SUPERFAMILY WD40 repeat-like 1292 1651 IPR036322 GO:0005515
Arst9g03239 1653 ProSitePatterns Trp-Asp (WD) repeats signature. 1541 1555 IPR019775 -
Arst9g03239 1653 SUPERFAMILY ARM repeat 837 1098 IPR016024 -
Arst9g03239 1653 SMART WD40_4 1618 1653 IPR001680 GO:0005515
Arst9g03239 1653 SMART WD40_4 1516 1554 IPR001680 GO:0005515
Arst9g03239 1653 SMART WD40_4 1335 1372 IPR001680 GO:0005515
Arst9g03239 1653 SMART WD40_4 1417 1454 IPR001680 GO:0005515
Arst9g03239 1653 SMART WD40_4 1289 1332 IPR001680 GO:0005515
Arst9g03239 1653 Pfam Beige/BEACH domain 350 560 IPR000409 -
Arst9g03239 1653 SUPERFAMILY Protein kinase-like (PK-like) 206 290 IPR011009 -
Arst9g03239 1653 MobiDBLite consensus disorder prediction 83 127 - -
Arst9g03239 1653 Gene3D BEACH domain 341 580 IPR036372 -
Arst9g03239 1653 SMART Beach_2 348 580 IPR000409 -
Arst9g03239 1653 Gene3D - 1266 1394 IPR015943 GO:0005515
Arst9g03239 1653 Gene3D Transferase(Phosphotransferase) domain 1 693 794 - -
Arst9g03239 1653 Pfam WD domain, G-beta repeat 1337 1372 IPR001680 GO:0005515
Arst9g03239 1653 Pfam WD domain, G-beta repeat 1518 1554 IPR001680 GO:0005515
Arst9g03239 1653 Pfam Protein kinase domain 205 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03239 1653 SUPERFAMILY BEACH domain 336 580 IPR036372 -
Arst9g03239 1653 SUPERFAMILY Protein kinase-like (PK-like) 711 802 IPR011009 -
Arst9g03239 1653 PANTHER GH12955P 1 1653 - -
Arst9g03239 1653 PANTHER GH12955P 1 1653 - -
Arst9g03239 1653 ProSiteProfiles BEACH domain profile. 336 606 IPR000409 -
Arst9g03239 1653 Gene3D Transferase(Phosphotransferase) domain 1 201 322 - -
Arst9g03239 1653 ProSiteProfiles Trp-Asp (WD) repeats profile. 1523 1556 IPR001680 GO:0005515
Arst9g03239 1653 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1523 1556 - -
Arst9g03239 1653 Gene3D - 1395 1653 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03239 Arst-Chr9 109912198 109920062 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Arst9g03239 Beach 9.7e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03239 K17601 - gmx:100809116 2693.3