Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03232 ATGCCAGTGAGGCAGATGAAAGAAAGCTCTGAGCAACACATTGTGATTAAACCCCATTCTCAGAACCACATGAATAAGGCACCAAAAGCTGCACAAAATGGAAAAGGACCACCACCACCACCACCATCACAAGAGAACCACCAGCACCACAACAACAACCACCACCACCACCACAACCACCAGTCATCACCTCAACCAAGAAACAAAGGGAGAAGAAGGGGCAGAGGTGGGAGAAAATCTGATCAAGGAGAGATTTTGATGAGACCAAGTTGCAGGCCCTGCACTGCTGGTGCTGCTCCTCCTCCTGTGACAGCAAATGGGATTAATAGTAATAATGTTGAGAATGGCTGCAAGATCAGTGGTGGTGGTGGTGACATAACAGACATGGGTTTTCCCACTTCAAGCAAATCCTTGAGCTTTGCTCGCAGGCCTGGCTATGGACAAGTTGGGACAAAATGCATTGTCAAGGCTAATCACTTCTTTGCTGAGCTACCGGACAAGGACTTGAACCAATATGATGTAACAATTAGCCCAGAAGTGAGTTCAAGAGCAGTAAATCGGTCCATAATAGCAGAACTTGTGAGGCTTTACAAAGAGTCTGATTTGGGGATGAGGCTTCCTGCTTATGATGGCAGGAAAAGTCTGTACACTGCTGGCCAGCTTCCCTTTGCCTGGAGAGAATTTAAGATAAAGCTTCTTGATGATAATGATGATGGAGTTAATGGCCCCAAAAGGGAAAGGGAATATAGGGTGGTGATCAAGTTTGTTGCTCGTGCAAACTTGCATCACTTGGGCCAGTTTCTAGCCGGCAAGCGAGCTGATGCACCACAGGAGGCACTTCAGATTCTTGATATTGTACTGAGAGAGCTATCAACTAAGAGGTACTGCCCCATTGGGAGGTCCTTCTTTTCACCTGATATTAGAACACCTCAACGGCTTGGAGAGGGGTTGGAATCATGGTGTGGATTCTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGGTATGTAACTTACAATTAATAACCATTTCTTACATACAAGTATGGAAGTACAATTAAGTGCTTACTATTTGTCATTATCATTATGTCATTAATATTGGTGAATTTATATTGTAAAGATAATTTGTGGTGCCTAACAGATTAAGAAAGCCCTTAGAGGAGTAAAGGTTGAAGTAACACACAGAGGAAGTGTAAGAAGGAAATATCGCGTTTCAGGATTGACTTCTCAACCAACAAGAGAACTTGTGTTCCCTGTTGATGAGAACTCAACTATGAAGTCAGTGGTTGAATACTTTCAAGAGATGTATGGTTTCACTATTCAATACACTCACCTTCCTTGCCTTCAAGTAGGAAATCAAAAGAAGGCAAACTACTTACCCATGGAGGCCTGTAAAATTGTGGAAGGGCAAAGGTATACAAAAAGATTGAATGAGAAGCAAATTACTGCACTGCTCAAAGTTACTTGCCAGAGACCGCGCGATCGCGAAAATGACATCTTAAGGACGGTGCAACATAATTCTTATAATGAAGATCCTTATGCAAAGGAATTTGGTCTTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGAATTCTTCCTGCCCCTTGGCTTAAATACCATGAAAGTGGGAAAGAAAAGAATTGTTTACCCCAAGTTGGTCAGTGGAACATGATGAACAAGAAAATGATTAATGGAATGACTGTTAGCCGGTGGGCGTGCATTAACTTTTCGCGGAGCGTGCAAGATAGTGTTGCTCGCACATTTTGTCATGAGCTTGCTCAAATGTGTCAAGTGTCTGGCATGGAATTCAATCCAGAGCCTGTCATTCCCATCTACAATGCCAAGCCAGAGCAGGTAGAGAAAGCTTTAAAGCATGTTTATCATGTGTCGACGAACAAATTGTTAGCAATATTGCCTGACAACAATGGATCTCTATATGGTGATCTCAAGCGTATTTGTGAAACTGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAACATGTCTTCAAGATCACCAAACAGTACTTGGCAAATGTATCTCTAAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTAGATGCTGTAAGCTGCAGAATACCGTTGGTTAGTGACATACCAACCATAATATTCGGAGCAGATGTTACTCACCCTGAAAATGGAGAAGACTCTAGCCCTTCAATAGCTGCTGTAGTAGCATCCCAGGACTGGCCTGAAGTGACAAAATATGCTGGTTTAGTGTGTGCTCAAGCTCATAGACAGGAGCTTATACAAGATTTGTACAAAACTTGGCACGATCCTGTTCGTGGCACAGTCAGCGGTGGCATGATCCGAGATTTGTTGGTTTCTTTTAGAAAGGCAACAGGGCAAAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTCTCCTTTATGAATTAGATGCAATCCGGAAGGCCTGTGCTTCCTTAGAACCAAACTATCAGCCTCCGGTAACTTTCATAGTTGTACAAAAACGACATCATACACGGTTATTCGCTAACAACCACCGGGACAGGAGCAGTACAGATAAGAGTGGGAATATAATGCCTGGGACTGTTGTTGATTCTAAAATATGTCATCCAACAGAATTTGATTTCTATCTATGCAGTCATGCTGGCATCCAGGGTACAAGTAGGCCTGCCCATTATCATGTTCTGTGGGATGAAAACAACTTCACAGCAGATGGAATTCAATCTTTGACAAACAATCTGTGTTACACATATGCTAGGTGTACTCGATCTGTATCAGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCATTTAGAGCACGTTTCTATATGGAGCCAGATATGCAAGAGAATGACTCTACAGGTGGTGGTAACGGTGGTGGTCGTGGAGGATCGAAGGGAACTCGAGCAGCCGGAGAGTGTGGTGTGAAGCCACTGCCAGCCTTGAAAGAGAATGTGAAGAGAGTAATGTTTTACTGTTGA 3024 0.4286 MPVRQMKESSEQHIVIKPHSQNHMNKAPKAAQNGKGPPPPPPSQENHQHHNNNHHHHHNHQSSPQPRNKGRRRGRGGRKSDQGEILMRPSCRPCTAGAAPPPVTANGINSNNVENGCKISGGGGDITDMGFPTSSKSLSFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTISPEVSSRAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLLDDNDDGVNGPKREREYRVVIKFVARANLHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIGMXLTINNHFLHTSMEVQLSAYYLSLSLCHXYWXIYIVKIICGAXQIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQHNSYNEDPYAKEFGLKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCHELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSTNKLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNIMPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENDSTGGGNGGGRGGSKGTRAAGECGVKPLPALKENVKRVMFYC 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03232 1007 SUPERFAMILY Ribonuclease H-like 624 960 IPR012337 -
Arst9g03232 1007 FunFam Argonaute 10 536 701 - -
Arst9g03232 1007 FunFam protein argonaute 10-like 707 1007 - -
Arst9g03232 1007 Pfam Argonaute linker 1 domain 297 338 IPR014811 -
Arst9g03232 1007 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 960 - -
Arst9g03232 1007 ProSiteProfiles Piwi domain profile. 638 959 IPR003165 GO:0003676
Arst9g03232 1007 Pfam Piwi domain 639 958 IPR003165 GO:0003676
Arst9g03232 1007 Pfam PAZ domain 384 488 IPR003100 GO:0005515
Arst9g03232 1007 MobiDBLite consensus disorder prediction 50 76 - -
Arst9g03232 1007 Pfam N-terminal domain of argonaute 152 287 IPR032474 -
Arst9g03232 1007 MobiDBLite consensus disorder prediction 1 108 - -
Arst9g03232 1007 Gene3D - 536 701 - -
Arst9g03232 1007 CDD PAZ_argonaute_like 385 471 - -
Arst9g03232 1007 MobiDBLite consensus disorder prediction 963 983 - -
Arst9g03232 1007 SUPERFAMILY PAZ domain 383 513 IPR036085 GO:0005515
Arst9g03232 1007 Pfam Argonaute linker 2 domain 498 544 IPR032472 -
Arst9g03232 1007 Gene3D paz domain 381 475 - -
Arst9g03232 1007 CDD Piwi_ago-like 516 958 IPR045246 -
Arst9g03232 1007 Gene3D - 707 1007 IPR036397 GO:0003676
Arst9g03232 1007 Pfam Mid domain of argonaute 555 632 IPR032473 -
Arst9g03232 1007 SMART Piwi_a_2 638 959 IPR003165 GO:0003676
Arst9g03232 1007 SMART PAZ_2_a_3 371 494 IPR003100 GO:0005515
Arst9g03232 1007 SMART DUF1785_2 296 343 IPR014811 -
Arst9g03232 1007 ProSiteProfiles PAZ domain profile. 385 472 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03232 Arst-Chr9 109838553 109845442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03232 1 1007 Eukaryotic Initiation Factors Gene Family AT5G43810 76.293 0.0 1547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03232 K11593 - gmx:100816999 1674.83