Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03227 ATGGAGGATGATGAGCTGCTGCTGTTGTTCCATGGTAGCCGCCGGCAGAGGAAAAGGCCCGTGCTGCTTCATCCTCTGTTAATGGTGATGCTGCTGTTCCTCTTTTCTCCGTTTGTTCACCCACTCACTGAAGAAGGACAAGCATTGATGTCAATCAAGGCTTCCTTCAACAATATGGCAGATGTTCTGCATGACTGGGACGATGTCCACAACGAAGACTTCTGCTCATGGCGTGGCATCTTCTGTGACAATTCTAGCTTCACCGTGATTTCTCTGAACTTGTCGAGCTTGTTACTGGGCGGGGAAATATCACCAGCCATTGGTGATTTAAGAAACTTGCAATCCCTAGACCTGCAGGGGAACAAATTATCCGGTCAAATACCAGATGAAATTGGGAACTGTGCTGATCTTACCCATCTGGATTTGTCTGACAATCAGCTATATGGTGATATACCTTTCTCCATATCAAAGCTGAAGCAGCTTGAGTTTTTGAATTTGAAGAGGAATCAGTTGACTGGTCCTATCCCCACAACTTTATCCCAAATCCCAAACCTGAAAACCCTCGATCTTGCACAAAACAAGCTCATTGGAGAGATACCTAGACTACTCTATTGGAATGAAGTCTTGCAGTACCTTGGATTGCGAGGGAACATGTTGACTGGAACTTTGTCCCCTGATATCTGTCAATTAACTGGTCTGTGGTACTTTGATGTAAGAGGCAATAACTTGACTGGAACTATACCTGACAGCATTGGGAACTGTACAAGTTTTGAAATCTTGGACATCTCATATAATCAGATTTCTGGAGAGATTCCCTATAATATTGGATTTCTTCAAGTGGCTACATTGTCACTTCAAGGAAATAGACTAACTGGGAAGATTCCAGAAGTAATTGGTTTAATGCAAGCCCTAGCAATTCTGGATTTGAGTGAGAATGAATTAGTAGGCCCTATCCCTCCAATACTAGGCAATTTGTCCTTCACTGGCAAGCTGTATCTTCATGGAAACAAGCTTACTGGTCCAATACCTGCAGAACTTGGCAACATGTCGAAATTGAGCTACTTGCAATTAAATGACAATCAACTGATGGGTAGAATTCCTAATGAGATTGGAAAACTTGAACACCTTTTTGAATTGAATCTTGCCAACAACCATCTTGTAGGGTCTATTCCGCATAATATAAGCTCTTGTACTGCATTGAATCAGTTTAATGTTCATGGAAATCAGTTAAGCGGCTCCATCCCACTTAGCTTCCGCAGCCTTGAGAGTTTGACCTACCTCAATCTCTCTGCTAACAATTTCAAAGGGAGCATTCCTACCGAGCTGGGACACATCATAAATCTTGATACTCTGGATCTGTCTAGCAATTATTTTTCTGGGCATGTACCAGCATCTGTGGGTTATCTAGAGCACCTTTTGACACTGAACCTGAGTCATAATCAACTTTATGGACCCTTGCCTGGCGAATTTGGCAATCTAAGAAGCATACAAATCATTGATATGTCCTCCAACAATTTGTCGGGTAGCATTCCCCCAGAGTTTGGCCAACTGCAGAACCTTATGTCTCTGATTTTGAATAACAACAACTTGCATGGGAAGATTCCTGATCAGCTTAGTAATTGTTTCAGTCTTACCTCTTTGAACTTATCCTATAATAACTTTTCTGGAGTTATTCCTGCTATGAAGAACTTTTCACGGTTTTCAGCTGAAAGCTTCCTTGGAAATCCTTTATTATGTGGGGATTGGTTAGGATCAATATGTCGTCCTCATATTGCAAAATCCAGAGTGTTTCTATCAAGAATTGCAGTTATATGTCTTGCTCTGGGTTTAATCACATTGTTGGCCATGGTAACTGTTGCTATCCGTAAATCAAGCCAATCGAAGCAATTGGTGAAAGGTTCCGGTAGAATTGGTCAAGGTATGGTGAACTTCATAAATGACATGTTAGTAACTTTGTTGTCCTTAATTCTTCTTACTTGTTTGTTTTTCCAATATTACTTATCAGGGCCACCGAAACTTGTTATTCTTCATATGGATATGGCTATCCACACCTTAGATGATATAATGAGAAGTACGGAGAATCTCAGTGAGAAATATGCTATAGGGTACGGTGCTTCTAGTACTGTATACAAGTGTGCTTTGAAGAATTCCCGACCAATTGCAGTTAAGCGATTGTACAACCAGCATCCACATAACCTGCAGGAATTTGAGACAGAACTTGAAACAATTGGCAGCATTAGGCACAGGAATCTTGTCACGTTGCATGGTTATGCACTAACACCCTATGGGAATCTCCTGTTCTATGATTATATGGCCAATGGCTCTTTGTGGGATCTTCTTCACGGTCCACTGAAGGTGAAACTTGATTGGGAGACACGCTTGAGAATTGCAGTTGGAGCTGCCGAAGGCCTTGCGTATCTCCATCATGACTGCAACCCTCGAATTGTTCACAGGGACATTAAGTCTTCGAACATCCTACTTGATGAGAACTTTGAGGCACACCTTTCGGACTTCGGAACTGCCAAATCCATCTCAAGTGCAAGAACACACACCTCAACCTATGTTCTTGGAACAATAGGCTATATTGACCCTGAATATGCCCGGACATCAAGGCTTATTGAAAAATCAGATGTTTATAGCTTTGGCATTGTTCTACTTGAGTTGCTTACTGGAAAGAAAGCAGTGGATAACGAGTCTAACTTGCACCAACTGATATTGTCCAAGGCAGATAACAACACTGTAATGGAGGCTGTCGATCCTGAGGTTTCCATTACCTGCATTGATTTGGCTCATGTCAAGAAGACCTTTCAGCTTGCACTGCTTTGCACGAAACGAAACCCTTCCGAAAGGCCTACTATGCACGAAGTTGCCAGGGTTCTGGTCTCACTACTCCCAGCCCCTCCAAGCAAGATGCGCTCTGGCCCTGCCAAGAATGTGGACTATGCACAGTTCTTGATTGGGAAGGGACAACAGCAATCAAAAGTGGAAGGGCTTCAACTGCAGCAGGATAACAATTCATCGAATGCTCAATGGTTTGTGCGCTTTGGGGATGCAATTTCCAAGAACACTCTCTAG 3075 0.4257 MEDDELLLLFHGSRRQRKRPVLLHPLLMVMLLFLFSPFVHPLTEEGQALMSIKASFNNMADVLHDWDDVHNEDFCSWRGIFCDNSSFTVISLNLSSLLLGGEISPAIGDLRNLQSLDLQGNKLSGQIPDEIGNCADLTHLDLSDNQLYGDIPFSISKLKQLEFLNLKRNQLTGPIPTTLSQIPNLKTLDLAQNKLIGEIPRLLYWNEVLQYLGLRGNMLTGTLSPDICQLTGLWYFDVRGNNLTGTIPDSIGNCTSFEILDISYNQISGEIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENELVGPIPPILGNLSFTGKLYLHGNKLTGPIPAELGNMSKLSYLQLNDNQLMGRIPNEIGKLEHLFELNLANNHLVGSIPHNISSCTALNQFNVHGNQLSGSIPLSFRSLESLTYLNLSANNFKGSIPTELGHIINLDTLDLSSNYFSGHVPASVGYLEHLLTLNLSHNQLYGPLPGEFGNLRSIQIIDMSSNNLSGSIPPEFGQLQNLMSLILNNNNLHGKIPDQLSNCFSLTSLNLSYNNFSGVIPAMKNFSRFSAESFLGNPLLCGDWLGSICRPHIAKSRVFLSRIAVICLALGLITLLAMVTVAIRKSSQSKQLVKGSGRIGQGMVNFINDMLVTLLSLILLTCLFFQYYLSGPPKLVILHMDMAIHTLDDIMRSTENLSEKYAIGYGASSTVYKCALKNSRPIAVKRLYNQHPHNLQEFETELETIGSIRHRNLVTLHGYALTPYGNLLFYDYMANGSLWDLLHGPLKVKLDWETRLRIAVGAAEGLAYLHHDCNPRIVHRDIKSSNILLDENFEAHLSDFGTAKSISSARTHTSTYVLGTIGYIDPEYARTSRLIEKSDVYSFGIVLLELLTGKKAVDNESNLHQLILSKADNNTVMEAVDPEVSITCIDLAHVKKTFQLALLCTKRNPSERPTMHEVARVLVSLLPAPPSKMRSGPAKNVDYAQFLIGKGQQQSKVEGLQLQQDNNSSNAQWFVRFGDAISKNTL 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03227 1024 Pfam Leucine rich repeat N-terminal domain 44 83 IPR013210 -
Arst9g03227 1024 Pfam Leucine Rich Repeat 112 134 IPR001611 GO:0005515
Arst9g03227 1024 Pfam Protein kinase domain 698 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03227 1024 Gene3D Ribonuclease Inhibitor 322 590 IPR032675 -
Arst9g03227 1024 SMART LRR_typ_2 421 445 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 110 134 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 182 206 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 230 254 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 373 397 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 469 492 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 517 541 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 493 516 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 349 372 IPR003591 -
Arst9g03227 1024 SMART LRR_typ_2 158 181 IPR003591 -
Arst9g03227 1024 ProSitePatterns Serine/Threonine protein kinases active-site signature. 815 827 IPR008271 GO:0004672|GO:0006468
Arst9g03227 1024 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 42 206 - -
Arst9g03227 1024 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 181 961 - -
Arst9g03227 1024 Gene3D Ribonuclease Inhibitor 207 321 IPR032675 -
Arst9g03227 1024 SMART serkin_6 695 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03227 1024 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 771 971 - -
Arst9g03227 1024 Gene3D Transferase(Phosphotransferase) domain 1 771 972 - -
Arst9g03227 1024 ProSitePatterns Protein kinases ATP-binding region signature. 701 723 IPR017441 GO:0005524
Arst9g03227 1024 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 207 316 - -
Arst9g03227 1024 ProSiteProfiles Protein kinase domain profile. 695 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03227 1024 ProSiteProfiles Leucine-rich repeat profile. 184 206 IPR001611 GO:0005515
Arst9g03227 1024 SUPERFAMILY L domain-like 44 336 - -
Arst9g03227 1024 Gene3D Phosphorylase Kinase; domain 1 671 770 - -
Arst9g03227 1024 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 317 590 - -
Arst9g03227 1024 SUPERFAMILY L domain-like 330 580 - -
Arst9g03227 1024 Pfam Leucine Rich repeat 541 556 IPR001611 GO:0005515
Arst9g03227 1024 Pfam Leucine Rich repeat 253 270 IPR001611 GO:0005515
Arst9g03227 1024 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 666 770 - -
Arst9g03227 1024 SUPERFAMILY Protein kinase-like (PK-like) 675 960 IPR011009 -
Arst9g03227 1024 Gene3D Ribonuclease Inhibitor 42 206 IPR032675 -
Arst9g03227 1024 Pfam Leucine rich repeat 137 195 IPR001611 GO:0005515
Arst9g03227 1024 Pfam Leucine rich repeat 447 506 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03227 Arst-Chr9 109805370 109812721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03227 278 560 Receptor kinase-like Gene Family AT5G07180 39.929 4.91e-47 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Arst9g03227 Pkinase 1.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03227 K20718 - gmx:100811653 1666.74