Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03183 ATGGAAGCGAATCATGGCGGTTTCAGCGAAGAACCGAACGACACTCAAAGCGCCGACGTATCACCCTCTGAGAAAACGCCAATAGCGAAAGCGCCGGAACCTAGGTTCCCGGAGCCGGTACCTCCGTCTCCGGTGACGGTTCCTATGAAGGAGGAGCTCGCGGACTCCGAGAGGAGCCTTGAGGAGCGTCTCCAGGTGGCGATTGTTCCCACGCCGGTGGCAAGGAGGCCGTCGAAGGACCGCCACACGAAGGTAGAGGGGCGCGGCCGGAGAATCCGGATGCCGGCGACGTGCGCCGCCAGGATCTTCCAGCTGACACGGGAGTTAGGCCACAAGTCCGACGGGGAAACAATACGGTGGCTGCTGGAACAGGCTGAGCCGGCCATCATCGAGGCCACCGGTACAGGAACGATCCCGGCAATCGCGGTTTCGGTGGGTGGCACACTCAAGATCCCAACGACGTCGACGGCGACGCCACAAGGCGAAGAAGAGGCGTCGAGAAAACGAAGAAGAAGGGCATCGAACAGCGAGTTCATTGATGTGAATGAAGAACAACAATCCTCAGTGTCTTCGGGTCTCGCACCAATCACACAAACCGCATACGGCGCTAGTTCTAGTGGTGGTGGACTCGTTCCAATGTGGACTATTGGTGGCGGCGGTGGTGGTTCTAATGGTCCTTTTTTCATGTTCCCAAATGCTGCTGCTACTTCTTCCGGGGATGGTGTTGCGAACCATCCTCATTATTGGGCTTTTCCAGCGAATGCGGCGCCGTATTTCAACGTTCAAGCTCGGCCTATTTCGGGGTTTGTTGCGGCTGAGCAATTAGGCCATGTGGTAGTGCAGCAGCCGCAGCCGCAGCCGCCGCCGCCGCCTAGTTGTTGTTCTTCTAATGGCTCTGCTAACTCTTGTTCTACTCTGGCTCCTAGTTTGAGCTCTGGAACCAGTGCTACTAATAATGGCTCTACTTCTACTTCTAGTGCTGCCACTCAGATGCTTAGGGATTTCTCTTTGGAGATTTACGACAAGAAAGAGTTGCAATTCTTGGCTTGCTCTTCCTCTTCTTCTGCCGTTGCTGAAGCTAAGTTGGAACAACCACCACCTCAGACTCTCAGTTCTAAGCCTTCAAACTGA 1131 0.5535 MEANHGGFSEEPNDTQSADVSPSEKTPIAKAPEPRFPEPVPPSPVTVPMKEELADSERSLEERLQVAIVPTPVARRPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEQAEPAIIEATGTGTIPAIAVSVGGTLKIPTTSTATPQGEEEASRKRRRRASNSEFIDVNEEQQSSVSSGLAPITQTAYGASSSGGGLVPMWTIGGGGGGSNGPFFMFPNAAATSSGDGVANHPHYWAFPANAAPYFNVQARPISGFVAAEQLGHVVVQQPQPQPPPPPSCCSSNGSANSCSTLAPSLSSGTSATNNGSTSTSSAATQMLRDFSLEIYDKKELQFLACSSSSSAVAEAKLEQPPPQTLSSKPSN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03183 376 MobiDBLite consensus disorder prediction 9 23 - -
Arst9g03183 376 MobiDBLite consensus disorder prediction 150 191 - -
Arst9g03183 376 MobiDBLite consensus disorder prediction 162 178 - -
Arst9g03183 376 MobiDBLite consensus disorder prediction 1 59 - -
Arst9g03183 376 Pfam TCP family transcription factor 78 168 IPR017887 -
Arst9g03183 376 MobiDBLite consensus disorder prediction 305 327 - -
Arst9g03183 376 ProSiteProfiles TCP domain profile. 78 132 IPR017887 -
Arst9g03183 376 MobiDBLite consensus disorder prediction 32 46 - -
Arst9g03183 376 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 34 342 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03183 Arst-Chr9 109378009 109379635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03183 72 348 TCP Transcription Factor Family AT5G51910 49.301 1.28e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Arst9g03183 TCP 4.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03183 - - ahf:112711692 618.616
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03183 9 109378009 109379635 Arst9g03183 9 109378009 109379635 ECH