Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03175 ATGGATGATGGTAACAACCCTCTACCACCACCTCTTCCTCCTCCGATACAAATCCCACCACCCACTACTCCAGCCCCAATCTCATCGTCCTCTTCCCCCTCTTCTACCGTGCGGTACCGGGGGACACGCTGCCGGAGTGGCAAGTGGGTGTCGGAGATAAGGGAGCCACGCAAGACGACGCGCATTTGGCTGGGGACATACCCAACACCTGAGATGGCTGCTGCTGCCTACGATGTTGCTGCTCTTGCCTTGAAGGGTCCCGATGCGCCTCTCAACTTCCCCGATTCCGTACTCTCTTACCCTATTCCTGCCTCATTGTCTCCTCCTGATATTCGCGCAGCAGCCGCCGCTGCCGCCGCTCAGGCTAGGCTTCCGAAGCCACCGCAGAACCCTCTAGAAGGTAGTGATAGTGCTGGTGGTAGTGGTAACGTTATTGTTGAAGGGTCTTGTTCCAGTTTGAGTACTGGAGAACAAGGAGGGATGATGGTGGCGGAGTACATTGACGAGGATGAGCTTCTGAACATGCCGAGTGTCATCGAAGACATGGCCAGGGGAATGCAGGTTAGCCCTCCAAGGATGCACTCTTTCTCCTCCGATGATTCCCCTGGGAATTCCGATTTAGATACCCTCTGGAGTTTTTGA 642 0.553 MDDGNNPLPPPLPPPIQIPPPTTPAPISSSSSPSSTVRYRGTRCRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDAPLNFPDSVLSYPIPASLSPPDIRAAAAAAAAQARLPKPPQNPLEGSDSAGGSGNVIVEGSCSSLSTGEQGGMMVAEYIDEDELLNMPSVIEDMARGMQVSPPRMHSFSSDDSPGNSDLDTLWSF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03175 213 CDD AP2 38 96 IPR001471 GO:0003700|GO:0006355
Arst9g03175 213 Gene3D AP2/ERF domain 37 95 IPR036955 GO:0003700|GO:0006355
Arst9g03175 213 SMART rav1_2 38 100 IPR001471 GO:0003700|GO:0006355
Arst9g03175 213 MobiDBLite consensus disorder prediction 1 42 - -
Arst9g03175 213 MobiDBLite consensus disorder prediction 188 213 - -
Arst9g03175 213 MobiDBLite consensus disorder prediction 191 213 - -
Arst9g03175 213 FunFam Ethylene-responsive transcription factor 2 37 95 - -
Arst9g03175 213 MobiDBLite consensus disorder prediction 1 27 - -
Arst9g03175 213 MobiDBLite consensus disorder prediction 134 156 - -
Arst9g03175 213 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 30 184 - -
Arst9g03175 213 ProSiteProfiles AP2/ERF domain profile. 38 94 IPR001471 GO:0003700|GO:0006355
Arst9g03175 213 Pfam AP2 domain 43 86 IPR001471 GO:0003700|GO:0006355
Arst9g03175 213 MobiDBLite consensus disorder prediction 118 156 - -
Arst9g03175 213 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03175 Arst-Chr9 109281405 109282596 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03175 39 213 AP2-EREBP Transcription Factor Family AT5G52020 53.552 1.79e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst9g03175 AP2 5.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03175 - - gmx:100776717 218.779