Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03153 ATGGGGTTTGAGGGTTCGATTAGCACCAACAGTGGGAACAGTAACAGAGCTGTTTTGAATGATATTTCCCAACCTATTCCCAGTTCATTGCAAAATCCATCTTCCTTCTCTTTCTCAGCTCAGAGAAAAATGGAGGGTCATGGTGATATGGGTCTCATAGGGGAAAATTTTGACACCAGTTTGATTGGGAGGTTGAGAGATGATGAGTATGAGAGCAGGTCGGGAAGCGATAATTTTGAAGGTGCCTCCGGTGATGATCAGGATGCCGGTGATGACCAGCCACGGAGGAAGAAGAGATACCATAGACATACTCCTCACCAAATTCAAGAGCTTGAGACTTTCTTCAAAGAGTGTCCTCATCCTGATGAGAAGCAAAGGTTGGATCTTAGTAAGAGGCTTGGCTTGGAGAATAAGCAAGTCAAGTTCTGGTTTCAGAATAGGAGAACCCAAATGAAGACCCAATTGGAACGGCATGAGAACATAATGCTTAGACAGGAGAATGAGAAGCTCAGAGCTGAGAATAGTTTGATGAAGGAAGCCATGTCAAACCCAGTGTGTAACAACTGTGGTGGCCCAGCCATTCCTGGCCAAATTTCATTCGAGGAGCACCAGATTCGAATTGAAAATGCTCGACTGAGGGATGAATTGAACCGCATATGTGCCTTGGCAAACAAGTTCCTTGGCAAGCCAATCTCATCACTGACCAATCCCATGGCTCTCCCAACCTCAAATTCTGGTCTAGAACTCGGTATTGGAAGGAATGGTATTGGTGTTTCGAGCCCCTTTGGAGCTCCCTTGCAGATGGGACTTGATTTAGGAGATGGAGTATTAGGCACTCAACCAGCAATATCTGGAATGAAGTCACCATTGGGATTGATGGGAAATGATGTTCAGCTTGAGAGATCTATGCTTGTAGATGTTGCACTGGCTGCCATGGATGAATTGATTAAGATGGCTCAGGCAGATAGCCCTCTTTGGATTAAGGGCTTTGATGGTGAGAGGGAGGTACTGAATCATGAAGAGTATGCAAGGGTGTTCAATCCTTGTATTGGTCCCAAACCTGCTGGTTATGTAACTGAAGCTACAAGAGAAACTGGGATAGTAATCATCAACAGTTTGGCCCTTGTGGAAACTTTGATGGATGCGAACCGATGGTTAGAGATGTTTCCATCAATGATTGCTAGAGCTGTCACCCTTGATGTTATATCTAGTGGCATGGGTGGAACCAGAAATGGTGCTTTGCAACTGATGCATTCGGAGATTCAATTACTTTCACCACTAGTCCCTATTCGTCAAGTGAGGTTCCTCCGGTTCTGTAAGCAGCATGCGGAAGGTGTATGGGCTGTAGTCGACGTTTCTGTTGAGATCGGTCGCGATGCTGCGAATGCACAGCCATTCATGAGCTGTCGGAGGCTTCCTTCTGGCTGCGTTGTGCACGATATGCCCAATGGTTACTCCAAGGTTACTTGGGTTGAACATTGGCAGTACGATGATAGTGTGGTGCACCAACTGTATCGGCCATTGATCAATTCTGGCTTTGGATTTGGTGCTCATAGATGGATAGCCACCCTCCAGAGGCAATGTGAATGCTTGGCAATCCTCATGTCCTCATCCATCTCAAGCGACGATCACACAGCATTAAGCCAGGCCGGCAGGAGAAGCATGTTGAAGCTGGCACAGCGCATGACCAGTAACTTCTGTTCGGGCGTTTGCGCCTCGTCGGCTCGCAAGTGGGACAGCCTTCACATTGGAACCTTGGATGATGACATGAGAGTAATGACGAGGAAGAATGTGGATGACCCTGGGGAGCCTCCAGGCATCGTCCTGAGTGCCGCCACATCTGTTTGGGTGCCGGTGTCACGGCAAAGGCTGTTCGAGTTTCTGCGCGACGAACGGCTTAGAAGCGAGTGGGACATTCTGTCGAACGGTGGACCTATGCAGGAGATGGTCCACATTGCCAAAGGCCAAGGACATGGAAATTGTGTTTCTCTCTTACGTGCTAATGGTGTGAATGCGAATGATAGCAGCATGGTGATTCTGCAAGAGACATGGACAGATGCATCCTGCTCGGTGGTAGTATATGCACCGGTGGATGTGCCGTCGTTGAACGTGGTGATGAGCGGTGGTGATTCTGCATATGTTGCACTCTTGCCTTCGGGTTTTGCCATTCTCCCCGATGGTCATTCGTCGTCCGGCTCCAACGGGAACTTAGCCAAGGGCGGCAGCAGCAGCGACGAGGGAGGTGGAAGCTTGCTGACGGTTGGGTTCCAAATCTTGGTGAATAGCCTGCCAACAGCAAAGCTTACAGTGGAGTCGGTGGATACTGTGAATAACTTGATCTCATGCACCATTCACAAGATCAAAGCTGCACTCACACTTTCATAA 2385 0.4839 MGFEGSISTNSGNSNRAVLNDISQPIPSSLQNPSSFSFSAQRKMEGHGDMGLIGENFDTSLIGRLRDDEYESRSGSDNFEGASGDDQDAGDDQPRRKKRYHRHTPHQIQELETFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENEKLRAENSLMKEAMSNPVCNNCGGPAIPGQISFEEHQIRIENARLRDELNRICALANKFLGKPISSLTNPMALPTSNSGLELGIGRNGIGVSSPFGAPLQMGLDLGDGVLGTQPAISGMKSPLGLMGNDVQLERSMLVDVALAAMDELIKMAQADSPLWIKGFDGEREVLNHEEYARVFNPCIGPKPAGYVTEATRETGIVIINSLALVETLMDANRWLEMFPSMIARAVTLDVISSGMGGTRNGALQLMHSEIQLLSPLVPIRQVRFLRFCKQHAEGVWAVVDVSVEIGRDAANAQPFMSCRRLPSGCVVHDMPNGYSKVTWVEHWQYDDSVVHQLYRPLINSGFGFGAHRWIATLQRQCECLAILMSSSISSDDHTALSQAGRRSMLKLAQRMTSNFCSGVCASSARKWDSLHIGTLDDDMRVMTRKNVDDPGEPPGIVLSAATSVWVPVSRQRLFEFLRDERLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRANGVNANDSSMVILQETWTDASCSVVVYAPVDVPSLNVVMSGGDSAYVALLPSGFAILPDGHSSSGSNGNLAKGGSSSDEGGGSLLTVGFQILVNSLPTAKLTVESVDTVNNLISCTIHKIKAALTLS 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03153 794 ProSiteProfiles START domain profile. 297 533 IPR002913 GO:0008289
Arst9g03153 794 CDD homeodomain 96 154 IPR001356 GO:0003677
Arst9g03153 794 MobiDBLite consensus disorder prediction 1 54 - -
Arst9g03153 794 SUPERFAMILY Homeodomain-like 83 154 IPR009057 -
Arst9g03153 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 93 791 IPR042160 -
Arst9g03153 794 SMART START_1 306 530 IPR002913 GO:0008289
Arst9g03153 794 MobiDBLite consensus disorder prediction 1 41 - -
Arst9g03153 794 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 93 791 IPR042160 -
Arst9g03153 794 Pfam START domain 307 530 IPR002913 GO:0008289
Arst9g03153 794 Coils Coil 148 183 - -
Arst9g03153 794 SMART HOX_1 95 158 IPR001356 GO:0003677
Arst9g03153 794 ProSitePatterns 'Homeobox' domain signature. 129 152 IPR017970 GO:0000981|GO:0006355
Arst9g03153 794 MobiDBLite consensus disorder prediction 69 106 - -
Arst9g03153 794 CDD START_ArGLABRA2_like 301 529 - -
Arst9g03153 794 Pfam Homeodomain 97 152 IPR001356 GO:0003677
Arst9g03153 794 SUPERFAMILY Bet v1-like 298 530 - -
Arst9g03153 794 SUPERFAMILY Bet v1-like 558 788 - -
Arst9g03153 794 FunFam Homeobox-leucine zipper protein GLABRA 2 306 529 - -
Arst9g03153 794 Gene3D - 84 170 - -
Arst9g03153 794 FunFam Homeobox-leucine zipper protein HDG1 83 170 - -
Arst9g03153 794 ProSiteProfiles 'Homeobox' domain profile. 94 154 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03153 Arst-Chr9 109108678 109113841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03153 44 791 Homeobox Transcription Factor Family AT3G61150 60.502 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Arst9g03153 START 2e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03153 K09338 - gmx:100785102 1370.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst9g03153 9 109108678 109113841 Arst9g03153 9 109108678 109113841 ECH