Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03142 ATGCTTGAATCCAAATTCAAACCTAAACCGTTACACTTGCACTTCATGCTCATGCTCATTCTCATTCTCCATCAGCATGGCAATGGCACAGAGGCACAGTCCCCGCTCCAGCCGGTGAAACCGCTTTCCTCCAACCACAACCCCCGGGACCCTTCAACCGTCCTCTTCATCGCCACCATCCTCGGAACCTTCATATTCGTCGCCGCGTTCGTAGCCTTCCTCCGCCGCTGCACAGAGCCGTACTTTACTCAACAGCAGAGCAATATCACACACTTGCGCTGTTCCTGCTGCAACGGCGGCATCAGCCCCGACATCCTCGAAACCTTCCCCATCGTGTTCTATTCCAGCATCAAGGACCTCAGAATCCGCAAAGAAGCTCCGCTAGAGTGTGCCGTCTGCCTCACCGAGTTCGCCGGCAACGACACTCTTCGGCTGCTTCCACACTGCAACCACGTGTTCCACCCTCCCTGCATCGACGCCTGGCTCTCTTCCCACGTCACCTGCCCCGTTTGCCGCGCCAATCTCAACCAACATCCCTCCCAAGTCGCCATTTCGGTGATAACACAATTGAGCGGCTACGGAGAAGAAGAACACGAAGAAGACGGTTCTGGAAACAGAGCAGAACAGAGCGTGGGTGGCGAGAGCATAATTGAGGGGAGCCCGTTGGCGCGTGACGCGAGTGAGGGACAGCGGAACAACGAAGAAGATAAAGGGATGCCGGAAAGAGCGGCAAAAGGGAAGCTTGGTGGGAAGGGGAGGGTTCTGAAGAGGTCGAATACGACGGGGCACTCGGTGGTGGAGGCAGGAGAGTGTATGGAGAGGTATACGCTGAGGTTGCCGGAGGATGTGAGGAGGTACATTATGGTGAACCATGGGGTGATGATGACGCAGCGTTCGGCGAGCTACAACGCGGCGGAGAGTTCGAAGAAAGGATTGTGTTGGAGTGACACGGAAGGAGGTAGCAGCAGAGGTAAGAAGTGTCAGAGCTCTGTTACAGGGAAGGGAAGAGTATGGAAGAATAATGGAGGTCAGTGA 1035 0.5546 MLESKFKPKPLHLHFMLMLILILHQHGNGTEAQSPLQPVKPLSSNHNPRDPSTVLFIATILGTFIFVAAFVAFLRRCTEPYFTQQQSNITHLRCSCCNGGISPDILETFPIVFYSSIKDLRIRKEAPLECAVCLTEFAGNDTLRLLPHCNHVFHPPCIDAWLSSHVTCPVCRANLNQHPSQVAISVITQLSGYGEEEHEEDGSGNRAEQSVGGESIIEGSPLARDASEGQRNNEEDKGMPERAAKGKLGGKGRVLKRSNTTGHSVVEAGECMERYTLRLPEDVRRYIMVNHGVMMTQRSASYNAAESSKKGLCWSDTEGGSSRGKKCQSSVTGKGRVWKNNGGQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03142 344 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Arst9g03142 344 SMART ring_2 130 171 IPR001841 -
Arst9g03142 344 MobiDBLite consensus disorder prediction 313 344 - -
Arst9g03142 344 Pfam Ring finger domain 129 172 IPR001841 -
Arst9g03142 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 106 181 IPR013083 -
Arst9g03142 344 PANTHER RING FINGER DOMAIN-CONTAINING 47 181 - -
Arst9g03142 344 MobiDBLite consensus disorder prediction 228 248 - -
Arst9g03142 344 SUPERFAMILY RING/U-box 129 180 - -
Arst9g03142 344 CDD RING-H2_EL5-like 129 172 - -
Arst9g03142 344 MobiDBLite consensus disorder prediction 193 261 - -
Arst9g03142 344 MobiDBLite consensus disorder prediction 321 344 - -
Arst9g03142 344 FunFam E3 ubiquitin-protein ligase ATL6 89 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03142 Arst-Chr9 109049663 109050747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03142 12 311 Rapid Response to Elicitors AT3G05200 32.581 4.66e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03142 K10664 - gmx:100782532 214.927