Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03132 ATGGGAAAAGCACCGTGTTGTGACAAACATGGAGTGAAGAGGGGATCTTGGACACCTGAAGAAGATGAGGCTTTAGTTGAGCATATCAAGAAGCATGGAGAAGGAAGTTGGCGCACTCTCCCCAAACATGCAGGACTACAGCGATGTGGAAAAAGTTGTAGGCTGAGGTGGATTAATTATCTACGACCTGGCATTAAGCGTGGCCCATTTACCTCTGAAGAAGAGACTAATATCATTCAACTTCATGCCTTGCTTGGCAACAGGTGGGCTGCTATAGCTTCTCAACTGCCAGGAAGAACAGACAATGAGATCAAGAACTATTGGAACACCCATCTAAAGAAAAATCTTCATCACCACTCCGGAGGGACTACACAACCTTGTCTCAGCCCTCATGCAGGGATTGTCAAGTCGGAATCTCCTTCGACTCGGCACATGGTACAATGGGAAAGTGCTAGAGTTGAGGCTGAGGCAAGGTTGTCAATGGAATCCTCATTGAACAATTCATGGTCACCAGCTAAAGCTTGCCCTGATTACTTTCTTAGATTATGGAATTCCGAGGTTGGAGAGTAACAAATAAGTAGCTGCAAACCAAAGCTTGAATATGACACAGGTGGATCAGATTCCGGCAACTATGAGTACCTTGATACTTCTGATTCCGCATTCAAACAATATCTGGATATGCCTGATGAAGATATAGAATTCTTGGACCACACTGACAGTTTCCTGAACCCTCCTGATGATGATGAGGAGGAGGAGGATGATAGATGTGACTAA 774 0.4483 MGKAPCCDKHGVKRGSWTPEEDEALVEHIKKHGEGSWRTLPKHAGLQRCGKSCRLRWINYLRPGIKRGPFTSEEETNIIQLHALLGNRWAAIASQLPGRTDNEIKNYWNTHLKKNLHHHSGGTTQPCLSPHAGIVKSESPSTRHMVQWESARVEAEARLSMESSLNNSWSPAKACPDYFLRLWNSEVGEXQISSCKPKLEYDTGGSDSGNYEYLDTSDSAFKQYLDMPDEDIEFLDHTDSFLNPPDDDEEEEDDRCD 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03132 257 CDD SANT 69 112 IPR001005 -
Arst9g03132 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Arst9g03132 257 SMART sant 66 114 IPR001005 -
Arst9g03132 257 SMART sant 13 63 IPR001005 -
Arst9g03132 257 Gene3D - 14 66 - -
Arst9g03132 257 FunFam Myb transcription factor 11 67 - -
Arst9g03132 257 CDD SANT 16 61 IPR001005 -
Arst9g03132 257 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Arst9g03132 257 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Arst9g03132 257 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 189 - -
Arst9g03132 257 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Arst9g03132 257 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Arst9g03132 257 FunFam MYB transcription factor 69 116 - -
Arst9g03132 257 MobiDBLite consensus disorder prediction 234 257 - -
Arst9g03132 257 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Arst9g03132 257 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Arst9g03132 257 MobiDBLite consensus disorder prediction 243 257 - -
Arst9g03132 257 Gene3D - 69 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03132 Arst-Chr9 108976455 108978153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03132 1 245 MYB Transcription Factor Family AT3G61250 52.901 8.85e-89 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Arst9g03132 Myb_DNA-binding 2.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03132 K09422 - gmx:100782075 361.303