Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03122 ATGGTGAGTCAGAGGCAGCGACTTGCACGGAAGCGCTTCAAAGAGGAGCACCCTGAGCTTTTTCCCAAGCCCGAGCCCACGCCTCCCAAGGACCCTGACAAAAAGAAGAAGAAGAAGAAGAAGAGCAACACATTTAAGAGCAGCTCCATAAAACGTAGAAGCGATGGCTCCGAAGAACTCGGCGTCTCTAAGAAGCCTTTCAAGAGCAATTACCGAAAGCACCCTCTCAGAGTCCCCGGCATGAAGCCCGGTGACACCTGCTTCATCTGCAAGGCCGCCGACCATATTGCCAAGTCTTGTCCTCAAAAAGCTGAATGGGAGAAGAATAAGATATGCTTGCGGTGTCGACGGCGTGGTCACCGAGCTAAGAATTGCCCTGAAGTTCAAGTTGGTGCCAATTATGACAAGTATTGTTACAATTGTGGAGAAACTGGTCATTCACTTGCAAATTGTCCCCACCCTGTTCAAGAAGGAGGGACAAAGTTTGCAGAGTGCTTTGTCTGTAAACAGCAAGGACACTTGAGTAAAAACTGCCCTCAAAATGCTCATGGCATCTATCCTAAGGGTGGTTGTTGTAAAATATGTGGTGGCGTGACACATTTGGCAAGGGATTGTCCCGACAAAGGGAAGAAAGCTCCTTTTGCTGCTAATGGGCCTGCTGATGGATCAATGAGACTGAGAAATGAACAGAGGCCTTGTGGAACGGTAACCAAATTTGCGAGTGGGGATGACATTGAGGATGACTTCATGACAGATGACATAAATAACAGAGACAAGGACAAGTCCTCTAAGTCCAAAGACGGTCAAGCAAAACCAAAGAAGGGTCCTAAAGTTGTGAACTTCAGCTAA 849 0.4759 MVSQRQRLARKRFKEEHPELFPKPEPTPPKDPDKKKKKKKKSNTFKSSSIKRRSDGSEELGVSKKPFKSNYRKHPLRVPGMKPGDTCFICKAADHIAKSCPQKAEWEKNKICLRCRRRGHRAKNCPEVQVGANYDKYCYNCGETGHSLANCPHPVQEGGTKFAECFVCKQQGHLSKNCPQNAHGIYPKGGCCKICGGVTHLARDCPDKGKKAPFAANGPADGSMRLRNEQRPCGTVTKFASGDDIEDDFMTDDINNRDKDKSSKSKDGQAKPKKGPKVVNFS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03122 282 Gene3D - 80 134 - -
Arst9g03122 282 MobiDBLite consensus disorder prediction 33 47 - -
Arst9g03122 282 FunFam Zinc finger CCHC-type-containing 9 162 213 - -
Arst9g03122 282 Gene3D - 135 186 - -
Arst9g03122 282 MobiDBLite consensus disorder prediction 252 273 - -
Arst9g03122 282 ProSiteProfiles Zinc finger CCHC-type profile. 112 127 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 ProSiteProfiles Zinc finger CCHC-type profile. 138 152 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 PANTHER OS04G0555800 PROTEIN 1 281 - -
Arst9g03122 282 MobiDBLite consensus disorder prediction 1 63 - -
Arst9g03122 282 SUPERFAMILY Retrovirus zinc finger-like domains 135 182 IPR036875 GO:0003676|GO:0008270
Arst9g03122 282 MobiDBLite consensus disorder prediction 8 32 - -
Arst9g03122 282 ProSiteProfiles Zinc finger CCHC-type profile. 165 180 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 SUPERFAMILY Retrovirus zinc finger-like domains 80 129 IPR036875 GO:0003676|GO:0008270
Arst9g03122 282 Pfam Zinc knuckle 137 153 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 Pfam Zinc knuckle 165 180 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 Pfam Zinc knuckle 86 102 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 SMART c2hcfinal6 111 127 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 SMART c2hcfinal6 86 102 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 SMART c2hcfinal6 164 180 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 SMART c2hcfinal6 191 207 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 SMART c2hcfinal6 137 153 IPR001878 GO:0003676|GO:0008270
Arst9g03122 282 MobiDBLite consensus disorder prediction 216 282 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03122 112 208 C2H2 Transcription Factor Family AT5G20220 29.825 9.27e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03122 - K17578 adu:107466926 530.02