Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03112 ATGTCAGAATCTGAAGAAGATAAAACAGACTTTGCTTCTCTAAAGTCAAAGGAGGACCAACAACAATCACCACCTCAACTTCCTCCTCCTTCCGCCATGGATTTCGATCTGGACTTGGAAACTTCGTGGCCTTTGGATCACTTGTCCTTCGTCTCCAATAACCCCATGTCACCTTTTCTGTTCCCAATCTCATCTGAACAACCTTCTTCTCCTCTTTGGCTCTTCTCTGATGCAGAAGATGAAAGGCACAACAACACTCTTGCTTCAGCTCCAGCTTTCTCTGATTTCCACAAGATATTCTCTTGTGATTCAAACTCAGTAACTGAAAAACCAGTGGAGAATGCTAATGATGAAGACAAGAAACTGTTGCCACCCATAGTGGCTATGCCACCATTGGAAATTTTGGATAGATATTGTGTAATAAAGGAAAGGATGACACAAGCGCTTCGATACTACAAAGAGTTGACAGAACAGAATGTTCTGGCGCAGGTTTGGGCACCTGTTAGAAATGGTAATAGGTTTGTGCTTACAACTTCAGGTCAACCATTTGTTCTTGATCCACATAGTAATGGACTCCACCAGTATCGAACGGTGTCCCTGATGTATGTGTTTTCGGCGGATGGAGAGAAAGAAGAAAGTCTTGGACTTCCTGGTCGAGTTTATCAGCAAAAAGTACCAGAATGGACACCTGATGTTCAGTATTATTCTACTAAGGAGTATCCTCGCAGAGATCATGCACAACATTACAATGTCCGCGGTACCTTGGCTTTGCCTGTCTTTGAACCTTCAATGCAGTCTTGTGTAGGTGTGTTGGAGTTGATCATGACTTCACAGAAGATTAACTATGCTCCTGAAGTTGACAAAATTTGCAGAGCCCTTGAGGCAGTGAATTTGAAGAGTTCAGAAATTTTAGGCCACCAATACACTCAGATTTGTAATGAAGGCCGCCAGAATGCGCTAGCAGAGATCTTGGAGATATTGACAGTGGTTTGCGAAACTCACAATTTACCTTTGGCGCAAACATGGGTTCCATGTAGGCATCGGAGTGTTCTGGCCCATGGAGGTGGCCTAAAGAAAAGTTGTTCAAGTTTTGATGGTAGTTGCATGGGGAAAGTTTGCATGTCTACAACTGATATAGCATTCTATATCATAGATGCTCATTTATGGGGTTTCCGAGAGGCCTGTGTCGAACATCACTTACAGCAAGGTCAAGGGGTTGCTGGCAGGGCTTTTTCTTCACATAGCATGAGCTTCTGTAGGAACATTACCCGATTCTGCAAAATTGATTACCCTTTAGTTCATTACGCTCTCATGTTTGGGTTAACTAGCTCCTTTTCAATCTGTTTGCGAAGCTCGCACACCGGAGATGATGACTATGTATTAGAGTTTTTTCTGCCACCTAGGATCACAGACTTTAACGAACAGAAGGCTTTGTTGGGATCCATATTGACAATAATGAAACAACATTTCCAGAGCCTTAAGATTGCTTCTGGTGTTGAACTTGAACAGAATGCTTTGGTTGAAACTATTGAAGCAACAATTGAAGGAGTTCATCTGAGGTTTGAATCTATTCCAGTTAGACAGGATGCTTCACCAAACGTGAGGGAGGAATTGGCACAAGATCCGTCGTTGCAGAAAATAATGATGGGCTGCAATGATGGAGGGAGTATTGGTGATCAGATACCCTCCTTAGAAACCAAAAACACAAATAAGCCATCAGAGAGGAAACGTGGGAAAACTGAGAAATCAATAAGTCTTGAAGTTCTGCAACGTTATTTTGCTGGGAGTCTTAAGGATGCTGCAAAGAGCCTTGGTGTTTGCCCCACTACAATGAAGCGCATCTGCAGGCAGCATGGGATATCCCGTTGGCCATCTCGAAAGATCAACAAAGTTAACCGTTCCCTGTCCAAGCTCAAGCGTGTTATTGAATCAGTCCAAGGTGCCGAAGGAGCATTCGCTTTGAATCCTCTGAGCACAAGTCCTCTTCCCTTTCCTGAGCATTCTACTCCAAACAAGTTCAGCCAGCAAGCCTCTCCAACTGAACCTCAGATAAGAGAAAATGAATTAGATGCCTCTAAAGTTTTAGAAACAACCAGAATTGCCAGAGCACAGTGTCTCGAGAAAATGGTTAATGATAAAAGCGGTTCTATTCGGGAGGTAGGGAAGGAAACAAAGGGGCCTAGAGCAAAGAGTTGCTCTAGTGCAGATAGCACAAATCCTACTTCTCATGGTTCATGCCATGGTAGCCCTCCTATCGAAAGCTCGCCCGTAAAAGATATATTCATTACATCAAACAATGATCAATGTGTTGGTCTAAGGTCACCAGAGGCAACAATGCAGCCGCCGAATAATACACTGAGCTACCCAACGACTTGCACTATGCCTGATATGGTGGCAACAGAACTTCAAGAGCCATTCGGAGGAATGCTGGTAGAAGATGCCGGAAGTTCCAAAGACTTGAGAAACCTATGTCCTTCTGTAGCTGAGGCAATTGTGGAGGACATGGCCCCGGAACCTTGCCGGACTAATCCTCCATTTTCTGGGTTGGCTCCCAAGCAATGCATGGATCCCCTTAAGGAGACAGTGACACCTTTTGCAGCTAGAATAGAAATGAAGACTGTCACTATTAAGGCAACATATAGAGAAGATATCATAAGGTTTAGGGTTTCTTTGAATTGTGGAATTGTGGAACTGAAAGAAGAAGTTGCCAAAAGGTTGAAACTAGAAGTAGGTACTTTTGATATCAAGTACCTTGATGATGATCATGAATGGGTTTTGATAGCATGTGATGCAGATCTACAAGAGTGCATAGATGTTTCAAGATCATCAGCAAGTAACATAATAAGAGTTTTGGTGCATGAAATAACTTCCAATCTTGGAAGCTCATGCGAGAGCTCAGGGTAG 2904 0.4325 MSESEEDKTDFASLKSKEDQQQSPPQLPPPSAMDFDLDLETSWPLDHLSFVSNNPMSPFLFPISSEQPSSPLWLFSDAEDERHNNTLASAPAFSDFHKIFSCDSNSVTEKPVENANDEDKKLLPPIVAMPPLEILDRYCVIKERMTQALRYYKELTEQNVLAQVWAPVRNGNRFVLTTSGQPFVLDPHSNGLHQYRTVSLMYVFSADGEKEESLGLPGRVYQQKVPEWTPDVQYYSTKEYPRRDHAQHYNVRGTLALPVFEPSMQSCVGVLELIMTSQKINYAPEVDKICRALEAVNLKSSEILGHQYTQICNEGRQNALAEILEILTVVCETHNLPLAQTWVPCRHRSVLAHGGGLKKSCSSFDGSCMGKVCMSTTDIAFYIIDAHLWGFREACVEHHLQQGQGVAGRAFSSHSMSFCRNITRFCKIDYPLVHYALMFGLTSSFSICLRSSHTGDDDYVLEFFLPPRITDFNEQKALLGSILTIMKQHFQSLKIASGVELEQNALVETIEATIEGVHLRFESIPVRQDASPNVREELAQDPSLQKIMMGCNDGGSIGDQIPSLETKNTNKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFALNPLSTSPLPFPEHSTPNKFSQQASPTEPQIRENELDASKVLETTRIARAQCLEKMVNDKSGSIREVGKETKGPRAKSCSSADSTNPTSHGSCHGSPPIESSPVKDIFITSNNDQCVGLRSPEATMQPPNNTLSYPTTCTMPDMVATELQEPFGGMLVEDAGSSKDLRNLCPSVAEAIVEDMAPEPCRTNPPFSGLAPKQCMDPLKETVTPFAARIEMKTVTIKATYREDIIRFRVSLNCGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECIDVSRSSASNIIRVLVHEITSNLGSSCESSG 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03112 967 MobiDBLite consensus disorder prediction 661 685 - -
Arst9g03112 967 ProSiteProfiles PB1 domain profile. 873 955 IPR000270 GO:0005515
Arst9g03112 967 SMART PB1_new 873 955 IPR000270 GO:0005515
Arst9g03112 967 MobiDBLite consensus disorder prediction 714 758 - -
Arst9g03112 967 MobiDBLite consensus disorder prediction 1 15 - -
Arst9g03112 967 MobiDBLite consensus disorder prediction 557 581 - -
Arst9g03112 967 SUPERFAMILY CAD & PB1 domains 870 958 - -
Arst9g03112 967 MobiDBLite consensus disorder prediction 730 749 - -
Arst9g03112 967 ProSiteProfiles RWP-RK domain profile. 570 651 IPR003035 -
Arst9g03112 967 Pfam RWP-RK domain 583 631 IPR003035 -
Arst9g03112 967 MobiDBLite consensus disorder prediction 659 686 - -
Arst9g03112 967 Pfam PB1 domain 873 954 IPR000270 GO:0005515
Arst9g03112 967 CDD PB1_NLP 874 954 IPR034891 -
Arst9g03112 967 PANTHER PROTEIN NLP8 65 967 IPR045012 GO:0003700
Arst9g03112 967 PANTHER PROTEIN NLP8 65 967 IPR045012 GO:0003700
Arst9g03112 967 Gene3D - 870 954 - -
Arst9g03112 967 MobiDBLite consensus disorder prediction 1 35 - -
Arst9g03112 967 FunFam RWP-RK domain-containing protein 870 954 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03112 Arst-Chr9 108676756 108680834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03112 275 967 NLP Transcription Factor Family AT4G24020 53.070 0.0 682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Arst9g03112 PB1 9.5e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03112 - - aip:107618129 1929.84