Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03106 ATGGGTAGCATCCAAGTAGCTGAAGCTGAAGAACAAGACACACACACAGTCTTTGTTGCGGTGGGAAACAACATTCACAAGACCCAACAACTATTGCATTGGGCTTCGCACAATTTCCCTTCCAAATCAATTTGCCTCCTTCACGTTCACCATCCTCACCCTATCGATTCCTCCCATAGAAACCCTTATAGGGATGAAACACGATCTCATTCATTCTTGGACAATGAAAGTAAAAAAATCCATGAACTCTTGGACCAATATGTTGCCACTCTTGTCCAAACAGGGGTAAGGGCACATAAATTGTTGATTGAGATGGACAATATTGAGAAAGGGATTATGGAAGCAATTGCTCAACACAATATTAGATTGCTTGTAATTGGAGCTGCAGCAGACAGATATAACTTGGGGAAATTGGCTGAGCAAGAGTCAACAAAGATTATTCCTGTACATAAACAAGCAGTTCCATCATGTAATATTTGGTTCATTTGCAATGGCAACATCAAATGTACCAGGGTAGATAGTAAACGTACACCTGAAATAGAGACTGCCCCTCCACTGTTGGTGCACAATTCAAATGCAGAAGCCGAACAATCACAGAAGTTTGAATATGAATCGATTCCTAATGGATTGGAACATTTAGATTCTGATGATGTGGAAGAAATTGAAACTGTCAGTTCCCACAGTTCATTACGTTCAAAATGGTCCTCCATTAGTGTTGCTGACAGTTCAAAGTTGTCAGGATTGCTGTTTTGTGAGGAGGAGGTAGATGGTGAAATTGAAGACAAAAGTGAAATAAATGGTAGACTAGAAGAGTCCACTAGAGATTCCAAAAGCATGAGGCGAAAAGAATTTGAAGAGGCTTTAAAGCAGTGGAAAGTCAAAGAAAGTTCTTTGGAGGATGAAGCATTAGAAATGGAAAGCCTGTGTGCTAAGGAGAAAAACAAAAGAAGAGAAGTTGAAGAACAATTGGCCAGAGAGAAGGAAGAATTACAAAAAACAAGGAATCAGCAAGATGAAATAATGTATGAGTTGCAAACTGTCCAAGAACAAAATTCAGCACTTGCTAACCAACTTTGTGAGACACAGGAAGCAGCAAAAGAGTTGGAGGAGAAGATTTTATCAGCTGTGGACCTCTTGATAAGTTTCAAGGAAAAACGAGATAGACTGCAGATAGAGTGCGCAAATGCAGTAAGGCAAGTCCGAGTGCTGAGGGAATTTGGAAAGTCACATACTTCATTTTCTTATGCGGTAGAATTCCCTGTATTTTCTTTCATGGAGATCAATCAGGCAACTAATGATTTTGATCCATCTTGGAAGATTGGAGAAGGAAGATATGGAAGTGTTTACAAAGGAGTGCTTCACAATATGCATGTTGCTATAAAAATGTTACCTTCTTATGGCTGTCACAGCCAATTGGAGTTTGAACGTCAGGTAGCAGTTTTGAGTCGGGTGAGACATCGAAACCTGTTGACACTGATTGGAACCTGTGCCGAGTCTAGGTCACTTGTGTATGAATATCTAAATAATGGCAGCCTTGAAGGTCACCTTGCCCGCAAAGAGAAGTCTCCACTTCCATGGCAAATTCGAATATCCGTTGCTGCTGACATATGTTCTGCTCTAATTTTTCTTCACTCTAGCGAGCCTAGTATTATACACGGGAATTTGAAAGCTAGCAAGGTTCTCCTTGATGCTAACTTTGTTGCCAAACTTGCTGACATTGGCATTCATGGTTTAGTTGAGAAGAATGTGGATTCAGCTGACACAACAACAACACACAACAAACCAAATGAAAGTTTGGCATATGTTGATCCAGAGTATCTTGCCACTGGCAAATTCACTCCAGAATCGGATGTGTATTCATTCGGAATCCTGTTGTTGCAACTTCTAACCGGAAGACCACTTTTGGGGCTAGTCAGAGATGTCAAATGTGCATTGGAAAAGGATAACCTTGAAGCAGTATTGGACTTCTCAGCTGGTGAGTGGCCACTTGATCAAACTATACATCTGGCCTATTTAGCATTGAGATGTTGTGACAAGACTTGGCTGAACCGGCCGGACCTCACATCAGATATTTGGGATGTTCTTGAACCATTCAGAACTACATGCATGAACATGCCGCCATATTTGACATCCAAGAAACATCGCCGCACTCCATCCCACTTTGTATGCCCCATTGTGCAGGAGGTAATGGAAGATCCGTACATAGCTGCAGATGGCTTTACGTATGAAGCCGAGGCAATAAGAGAATGGTTGGATAGTGGTCACGACACTTCCCCCATGACAAACCTCAAGCTTGAGCACACAAATTTAGTGCCTAATTATGCATTACATAATGCAATTCAAGAGTGGCAGCAACTACAGTGA 2364 0.4137 MGSIQVAEAEEQDTHTVFVAVGNNIHKTQQLLHWASHNFPSKSICLLHVHHPHPIDSSHRNPYRDETRSHSFLDNESKKIHELLDQYVATLVQTGVRAHKLLIEMDNIEKGIMEAIAQHNIRLLVIGAAADRYNLGKLAEQESTKIIPVHKQAVPSCNIWFICNGNIKCTRVDSKRTPEIETAPPLLVHNSNAEAEQSQKFEYESIPNGLEHLDSDDVEEIETVSSHSSLRSKWSSISVADSSKLSGLLFCEEEVDGEIEDKSEINGRLEESTRDSKSMRRKEFEEALKQWKVKESSLEDEALEMESLCAKEKNKRREVEEQLAREKEELQKTRNQQDEIMYELQTVQEQNSALANQLCETQEAAKELEEKILSAVDLLISFKEKRDRLQIECANAVRQVRVLREFGKSHTSFSYAVEFPVFSFMEINQATNDFDPSWKIGEGRYGSVYKGVLHNMHVAIKMLPSYGCHSQLEFERQVAVLSRVRHRNLLTLIGTCAESRSLVYEYLNNGSLEGHLARKEKSPLPWQIRISVAADICSALIFLHSSEPSIIHGNLKASKVLLDANFVAKLADIGIHGLVEKNVDSADTTTTHNKPNESLAYVDPEYLATGKFTPESDVYSFGILLLQLLTGRPLLGLVRDVKCALEKDNLEAVLDFSAGEWPLDQTIHLAYLALRCCDKTWLNRPDLTSDIWDVLEPFRTTCMNMPPYLTSKKHRRTPSHFVCPIVQEVMEDPYIAADGFTYEAEAIREWLDSGHDTSPMTNLKLEHTNLVPNYALHNAIQEWQQLQ 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03106 787 ProSiteProfiles Protein kinase domain profile. 434 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g03106 787 SUPERFAMILY Protein kinase-like (PK-like) 410 695 IPR011009 -
Arst9g03106 787 Gene3D Phosphorylase Kinase; domain 1 407 506 - -
Arst9g03106 787 Gene3D HUPs 15 141 IPR014729 -
Arst9g03106 787 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 129 - -
Arst9g03106 787 Coils Coil 379 399 - -
Arst9g03106 787 ProSitePatterns Protein kinases ATP-binding region signature. 440 461 IPR017441 GO:0005524
Arst9g03106 787 Pfam U-box domain 718 784 IPR003613 GO:0004842|GO:0016567
Arst9g03106 787 CDD RING-Ubox_WDSUB1-like 718 773 - -
Arst9g03106 787 Gene3D Transferase(Phosphotransferase) domain 1 507 702 - -
Arst9g03106 787 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 716 787 IPR013083 -
Arst9g03106 787 Pfam Protein tyrosine and serine/threonine kinase 439 686 IPR001245 GO:0004672|GO:0006468
Arst9g03106 787 PANTHER OS02G0152300 PROTEIN 17 782 - -
Arst9g03106 787 ProSiteProfiles U-box domain profile. 716 787 IPR003613 GO:0004842|GO:0016567
Arst9g03106 787 Coils Coil 281 350 - -
Arst9g03106 787 SMART Ubox_2 720 783 IPR003613 GO:0004842|GO:0016567
Arst9g03106 787 SUPERFAMILY RING/U-box 715 784 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03106 Arst-Chr9 108640678 108646319 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03106 76 784 U-box Gene Family AT3G49060 44.912 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Arst9g03106 PK_Tyr_Ser-Thr 6.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03106 - - aprc:113871315 1008.05