Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03080 ATGGTATCGAAGAACCCGAACCCCTCAGAGGGATTCTACCTCGATCCCAGTGCGCTCCCCAGCCTCGTTCCGTTGGCCGCAACCCCGGGGACGTCCACCGCCAACTCGGCGGAGGACCCCGCCAAGAAGACGCGGAAGCCATACACTATAACTAAATCTAGAGAGAGCTGGACCGAACCCGAGCACGACAAGTTCCTCGAAGCTCTTCAACTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCGAAGACAGTTATCCAGATACGTAGCCATGCACAGAAATACTTTCTAAAAGTTCAGAAGAGCGGGACAAGTGAACATCTTCCTCCACCCAGACCAAAACGAAAAGCCGCTCATCCATATCCTCAGAAAGCTTCTAAAAATGCACCAGTACTCGCGCAAGTATCTGGATCATTTCAGTCTTCATCTGCTTTGCTTGAATGTGGACATGTCCTGCAGCCTGATTCTTCAGCAATGCTTAAAACACCTATTGTTAGCACTGCGGTGTCTTCCTGGTCAAACAACACCCTGCAGCAAAAAACCAATGTATTGCATGGGCAAAAAGTAAATAACTGTTGTAGTAGCAGCGAAAGCACTCCCAGAGCACAAGCACCTGGTGAATCTAATGTTCAAGGGAATAATAGCCATCCTTTGAGAGTTCTTCCGGATTTCACTCAAGTGTACCGGTTCATTGGCAGTGTATTTGACCCAAGCATAACTGGGCATCTACAGAAACTAAAAAGGATGGATCCTATAGATGTTGAAACGGTGCTACTGCTGATGAGAAATCTGTCTATCAATTTAAGGAGCCCAGATTTTGAGGATCATGTTGCTTGCCTCGTATGA 855 0.4702 MVSKNPNPSEGFYLDPSALPSLVPLAATPGTSTANSAEDPAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKSGTSEHLPPPRPKRKAAHPYPQKASKNAPVLAQVSGSFQSSSALLECGHVLQPDSSAMLKTPIVSTAVSSWSNNTLQQKTNVLHGQKVNNCCSSSESTPRAQAPGESNVQGNNSHPLRVLPDFTQVYRFIGSVFDPSITGHLQKLKRMDPIDVETVLLLMRNLSINLRSPDFEDHVACLV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03080 284 MobiDBLite consensus disorder prediction 24 57 - -
Arst9g03080 284 CDD SANT 56 99 IPR001005 -
Arst9g03080 284 MobiDBLite consensus disorder prediction 197 218 - -
Arst9g03080 284 ProSiteProfiles SANT domain profile. 52 103 IPR017884 -
Arst9g03080 284 SUPERFAMILY Homeodomain-like 48 104 IPR009057 -
Arst9g03080 284 ProSiteProfiles Myb-like domain profile. 49 99 IPR001005 -
Arst9g03080 284 SMART sant 53 101 IPR001005 -
Arst9g03080 284 FunFam protein REVEILLE 6 isoform X1 56 104 - -
Arst9g03080 284 Gene3D - 57 104 - -
Arst9g03080 284 MobiDBLite consensus disorder prediction 104 131 - -
Arst9g03080 284 NCBIfam myb-like DNA-binding domain, SHAQKYF class 52 101 IPR006447 GO:0003677
Arst9g03080 284 MobiDBLite consensus disorder prediction 39 57 - -
Arst9g03080 284 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 49 103 IPR017930 -
Arst9g03080 284 Pfam Myb-like DNA-binding domain 54 99 IPR001005 -
Arst9g03080 284 PANTHER SWI/SNF COMPLEX-RELATED 32 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03080 Arst-Chr9 108283787 108287906 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst9g03080 Myb_DNA-binding 3.3e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03080 - - aip:107619038 543.888