Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03073 ATGGCTTCTGATCTTCAAGCGAGGGCCAAAGAGGCATTCGTCGATGAAGACTATGATCTCGCGATGGACCTTCTCACTAAGGCCATTGCTTTTGAACCTAACAACGCTCAATACTATGCCGATCGTGCCCAAGCCAACATCAAACTCAACAACCTCGCTGAGGCTGTTGCTGATGCAAACATGGCAATTGAGTTGAATCCTTCTCTCCCAAAAGCATATTTGCGGAAAGGTACTGCATGCATGAAGCTTAAGGAATATCAGACAGCTAAGGCAGCTCTAGAGATGGGTGCTTCATTGGCTCCAGGAGATTCAAAATTCATTGATATGCTCAAACAATGTCATGAGCTCATTGCTGAAGAATCTGATGTCACACCTATAATACCAGAAAAGCACACGACAACTCGGGATGTTTCTGCCAAAGAACTTGAGCAAAAGAATGACGTTTCACAGCAGATGACAGTAGCAGTTGCTAAACCTAAATACAGGCATGAATTCTACCAAAAACCTGATGAGGTGGTTGTTACCATTTTTGCAAAGGGCATTCCACGGGACAGCGTGACTGTTGATTTTGGTGAACAAATACTAAGTGTTAGAATCGATGTACCTGGTGAGGATGCATATGCTCTTCAACCTCGCTTGTTTGGAAAGATCGTACCTTCCAGATGCCGATATGAAGTTTTGTCTACCAAGATGGAAATCCGGCTTGCAAAAGCAGAACCTATCCACTGGGCAGCTCTTGAATTCCGTGGAGGTGCAACGGTTCCACAGAGGGCTATTGTTTCATCAGTTATCAACGTTCAAAGGCCTACTTACCCTTCCTCTAAACCAAAAAGAATAGATTGGGATAAGCTGGAAGCTCAAGTTAAGAAAGAGGAAAAAGATGAAAAGCTTGATGGTGACGCAGCGCTGAACAAATTCTTCCGCCAGATATATCAAGATGCAGATGAGGACACCAGAAGAGCAATGAGCAAATCATTTGTGGAGTCTAATGGAACCGTATTGTCCACAAACTGGAAAGAAGTGGGATCCAAGAAGGTTCAGGGAAGTGCTCCTGATGGCATGGAGTTGAAGAAATGGGAATATTAG 1086 0.4401 MASDLQARAKEAFVDEDYDLAMDLLTKAIAFEPNNAQYYADRAQANIKLNNLAEAVADANMAIELNPSLPKAYLRKGTACMKLKEYQTAKAALEMGASLAPGDSKFIDMLKQCHELIAEESDVTPIIPEKHTTTRDVSAKELEQKNDVSQQMTVAVAKPKYRHEFYQKPDEVVVTIFAKGIPRDSVTVDFGEQILSVRIDVPGEDAYALQPRLFGKIVPSRCRYEVLSTKMEIRLAKAEPIHWAALEFRGGATVPQRAIVSSVINVQRPTYPSSKPKRIDWDKLEAQVKKEEKDEKLDGDAALNKFFRQIYQDADEDTRRAMSKSFVESNGTVLSTNWKEVGSKKVQGSAPDGMELKKWEY 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03073 361 Gene3D Tetratricopeptide repeat domain 1 155 IPR011990 GO:0005515
Arst9g03073 361 Pfam SGS domain 280 359 IPR007699 -
Arst9g03073 361 FunFam Protein SGT1 homolog 1 128 - -
Arst9g03073 361 ProSiteProfiles SGS domain profile. 270 361 IPR007699 -
Arst9g03073 361 Gene3D - 159 248 IPR008978 -
Arst9g03073 361 CDD p23_CS_SGT1_like 164 247 - -
Arst9g03073 361 PANTHER PROTEIN SGT1 HOMOLOG 1 359 IPR044563 GO:0051087
Arst9g03073 361 SUPERFAMILY HSP20-like chaperones 156 255 IPR008978 -
Arst9g03073 361 Pfam Tetratricopeptide repeat 71 101 IPR019734 GO:0005515
Arst9g03073 361 Pfam Tetratricopeptide repeat 36 68 IPR019734 GO:0005515
Arst9g03073 361 SUPERFAMILY TPR-like 5 117 IPR011990 GO:0005515
Arst9g03073 361 Pfam CS domain 162 237 IPR007052 -
Arst9g03073 361 FunFam Protein SGT1 homolog A 159 250 - -
Arst9g03073 361 ProSiteProfiles CS domain profile. 158 247 IPR007052 -
Arst9g03073 361 Coils Coil 42 62 - -
Arst9g03073 361 SMART tpr_5 70 103 IPR019734 GO:0005515
Arst9g03073 361 SMART tpr_5 36 69 IPR019734 GO:0005515
Arst9g03073 361 SMART tpr_5 2 35 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03073 Arst-Chr9 108230659 108233301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03073 1 101 U-box Gene Family AT3G07370 29.524 3.03e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03073 K12795 - gmx:100780174 545.814