Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g03063 ATGGAACAGAAGCACGTGCTGTTGTCTGCATTGACTGTTGGGGTTGGGTTGGGTGTTGGGTTGGGATTGAGCTCAGGGCAGAAATGGGTTGGAGGAGGGAGCCATGACTCTGATGAGCTTCCTGGGGAACAGATTGTTCAGGAGCTCAAGAAGCAGATCATTGATGGAAAGAACAGCAAGGTCACTTTTGACGAGTTCCCTTATTACTTGAGTGAGAAAACTCGAGTTTTGTTGACAAGTGCTGGATATGTTCATTTAAAACAACAACACTTCTCCAAACACATGAGGAACCTTTCACCAGTAAGCAGAGCTATTTTGCTCTCCGGACCTGCAGAAATTTACCAGCAAATGCTTGTCAAAGCTTTAGCACACTTTTTTGATTCCAAGTTGCTGCTGCTAGATATTACTGAATTCTCTTTGAAGATGCAGAGCAAATATGGATGCTCTAGAAGAGAATCATGTTTGAAAAGGTCCCTATCCGAGGTAACTATGGAGCGAATGACTGGTTTATTTAGTAACTTTTCACTCCTCCCGTCAGCATGCGAAAGTAGAGGTACTGAAGGAAGAAGTTCTCAAGGTAGTCATCGTCGACATCGTAGTAGCGGACAAGAAAATAGACAAAGTAGCGGTGGAAATGAAAATTTTAACAATGCTTCAAAGCTCCGAAGGACTTCCTCTTCTTCATCTGATATAACTACCTCCCTGTTTGGTCCAAATGATTCAGGTTCTTTGCAGCGAACAAACCATGTTTCTTTTGATGAAAAGCTATTTGTGAAGTCACTTTACAAGGTCTTGGTTTCTGTCTCAGAAACTAGTGCCATTGTTCTATATATCAGGGATGTTGATAAGCTATTCCTTCGATTGCCGACGATGTATAGTATGTTGCAAAGGCTAATGAAGAAACTGACAGGGTCAGTGTTGATACTTGGTTCCCAAGTGGTGGATTCAGATTGCTGTAAAGAAGTTGATGAACGGCTAGGTATATTATTTCCTTACAACATTGAGATCAAACCCCCTGAAGATGAGACTCAATCTGGCAACTGGAAAGCCCAACTGGAAGAGGACATGAAAGTATTTCAGTTTCAAGATAACAGAAACCACATTGCTGAAGTTCTATCAACAAGTGGCATCGATTGTGATGACTTGCATTCAATCTGCCACTCTGACACTATGCTACTCAGTAACTACATTGAGGAAGTCGTGGCATCTGCAGTTTCCTATCATTTGATGAATACCAAGGATCCACAATACCGGAACGGAAAGCTAGTTGTATCGGCTAAGAGTCTGTGTCAGGCGCTGAATCTGTTCCAGGAAGGCAAAGTCAGTGGAAAGGATAATACAAAGACTAATGAGACCAAGGATGATGCGGGAGAAGATGGTAGTGGTGCAAAGAATGATACAAAGAGCGATGCCCAAGCACCTGAAAAAAGCGAGGGAGAGAAATCTAACCCAGTAACAAAGAAGGATGGAGAGAATAGCACTCCTGCAAAAGCAGCTGAACCTCCTCCGGACAATGAGTTCGAGAAGCGAATAAGACCAGAGGTGATACCTGCAAATGAGATAGGGGTTACATTTGGAGACATTGGTGCATTGGATGAGATTAAAGAATCACTTCAAGAGGCGGTGATGCTTCCCCTTAGAAGACCAGACCTCTTCAAAGGTGGCCTTCTAAAGCCTTGTAGAGGTATATTGCTTTTCGGGCCTCCTGGTACAGGAAAAACAATGCTTGCAAAGGCGATTGCAAATGAAGCAGGTGCAAGTTTCATTAATGTGTCAATGTCCACCATAACTTCAAAGTGGTTTGGGGAAGATGAGAAGAATGTTCGAGCTTTGTTCACGCTTGCAGCAAAGGTTGCTCCAACTATTATTTTTGTTGACGAGGTTGATAGCATGCTTGGGCAGCGTAACAGAGCCGGAGAGCACGAGGCAATGAGGAAGATTAAAAATGAATTCATGACTCATTGGGACGGACTATTGACAAAGCCTAGTGAGCAGATTCTGGTTCTTGCTGCAACCAACAGGCCATTTGATCTCGATGAGGCTATTATAAGACGGTTCGAGCGCAGGATTATGGTTGGTCTTCCATCTGCTGAAAACCGGGAAGGCATCTTGAAAACTCTTCTAAGCAAGGAAAAACATGAAAATATAGACTTCAAAGAGGTTGCAGCTATGACGGAAGGATATAGCGGGAGTGATCTTAAGAATTTGTGCATGACAGCGGCTTATCGGCCTGTTAGGGAGCTACTCAAGCAGGAGACCATGAAGGAAGTGGAACGGAAGAAGAAAGCGGCACAAGGCCAAATCTCAGAAGATATGTCCAATGCTACAGAGGATAAAAAAGGTCAATCAGTTACCCTGAGGCCTTTGACCATGGAAGACATTAGAAAGGCAAAGAATCAGGTGGCTGCAAGTTTTGCTGCAGAAGGATCAATAATGAGCGAGCTGAAGCAGTGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAGCAACTCACTTATTTCCTATAG 2514 0.4344 MEQKHVLLSALTVGVGLGVGLGLSSGQKWVGGGSHDSDELPGEQIVQELKKQIIDGKNSKVTFDEFPYYLSEKTRVLLTSAGYVHLKQQHFSKHMRNLSPVSRAILLSGPAEIYQQMLVKALAHFFDSKLLLLDITEFSLKMQSKYGCSRRESCLKRSLSEVTMERMTGLFSNFSLLPSACESRGTEGRSSQGSHRRHRSSGQENRQSSGGNENFNNASKLRRTSSSSSDITTSLFGPNDSGSLQRTNHVSFDEKLFVKSLYKVLVSVSETSAIVLYIRDVDKLFLRLPTMYSMLQRLMKKLTGSVLILGSQVVDSDCCKEVDERLGILFPYNIEIKPPEDETQSGNWKAQLEEDMKVFQFQDNRNHIAEVLSTSGIDCDDLHSICHSDTMLLSNYIEEVVASAVSYHLMNTKDPQYRNGKLVVSAKSLCQALNLFQEGKVSGKDNTKTNETKDDAGEDGSGAKNDTKSDAQAPEKSEGEKSNPVTKKDGENSTPAKAAEPPPDNEFEKRIRPEVIPANEIGVTFGDIGALDEIKESLQEAVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRNRAGEHEAMRKIKNEFMTHWDGLLTKPSEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSAENREGILKTLLSKEKHENIDFKEVAAMTEGYSGSDLKNLCMTAAYRPVRELLKQETMKEVERKKKAAQGQISEDMSNATEDKKGQSVTLRPLTMEDIRKAKNQVAASFAAEGSIMSELKQWNDLYGEGGSRKKEQLTYFL 837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g03063 837 Pfam ATPase family associated with various cellular activities (AAA) 563 693 IPR003959 GO:0005524|GO:0016887
Arst9g03063 837 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 522 750 IPR027417 -
Arst9g03063 837 SMART AAA_5 559 696 IPR003593 GO:0016887
Arst9g03063 837 MobiDBLite consensus disorder prediction 204 232 - -
Arst9g03063 837 MobiDBLite consensus disorder prediction 189 203 - -
Arst9g03063 837 Pfam AAA+ lid domain 715 758 IPR041569 -
Arst9g03063 837 MobiDBLite consensus disorder prediction 759 785 - -
Arst9g03063 837 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 836 - -
Arst9g03063 837 MobiDBLite consensus disorder prediction 767 783 - -
Arst9g03063 837 ProSitePatterns AAA-protein family signature. 666 685 IPR003960 GO:0005524|GO:0016887
Arst9g03063 837 Gene3D - 522 694 IPR027417 -
Arst9g03063 837 MobiDBLite consensus disorder prediction 444 487 - -
Arst9g03063 837 Coils Coil 754 774 - -
Arst9g03063 837 MobiDBLite consensus disorder prediction 182 232 - -
Arst9g03063 837 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 522 696 - -
Arst9g03063 837 Gene3D - 695 777 - -
Arst9g03063 837 MobiDBLite consensus disorder prediction 441 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g03063 Arst-Chr9 108056818 108061695 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g03063 523 768 Calmodulin-binding Proteins AT3G56690 40.000 1.93e-44 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g03063 - - gmx:100804099 1171.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Arst5g04436 5 105647277 105652619 Arst9g03063 9 108056818 108061695 PCT
Arst9g03063 9 108056818 108061695 Arst5g04437 5 105647277 105652619 PCT