Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02996 ATGGACGTGCCTAAACACCGTTCCGGTCGATCAACGTCCCTCAGGGACGCCACCGACTCCTCAAAGATGGAAGGCACCGGCAGCTGGGACGCCCTCGAATGGACTAAGATTGAGCCGGTTTCGCGATTCGTCTCGCATACGAATCTTGATTTCTTGCTTGAGGCGGAGCATGTTATTGCCGAAGGACATGGTGTTGTTCTTGTTAATACAGATGATGCAGGCATGTTGATGATAACAAATTTTCGTCTTCTTTTTCTGAGTGAGGGAACTCGAAAAGTTATTGCCCTTGGAACAATACCACATGCAACCATTGAGAAGTTTAACAAGACAGTTGCAAAGACTCAATCAAATGCTCGCCAACTCGAGAAGACACCACCTCAAAGATTGCTCCAGGTGATTGGCAAAGATATGAGAATTATAGTCTTTGGTTTCAGACCTCGTACAAAACAGAGACGTATAATATTTGATGCACTACGAAGGTGTACAAAACCAGCAACGTTATGGGATCTTTATGCTTTTGTTTGTGGACCTTCTAGGTTTAGGAACACAAATCCACAAGTGCGCTTATTGGATGAGTATTTTCGACTTCTTGGCAAAGGTGCTCGTGCATCAACTGATATGATTGAAAGTGGGTCCTTCACCTTGTCAAATGACTTATGGAGAATAAGTAGCATAAACTCCAACTATAAAATGTGTCCGAGTTATCCATTTGCTTTGGTTGTTCCCAAGATCATTAGTGATGATGAAGTTCTCTTGGCTTCCAACTTTCGTGCAAGGGGTCGGCTGCCTGTAGTTTCATGGTGTCATCTTGGTACTGGTGCAGTTCTTGCACGTTCATCCCAACCCTTAGTTGGTCTGATGATGAATATGAGGAGCAACATGGATGAAAAACTCGTGGCTGCACTTTGCAGCAAACTTGATGATGGCTCACGGAGAAAGCTATATATTGCTGATGCAAGGCCTAGGAAAAATGCATTAGCTAATGGAGCCATGGGTGGTGGCTCAGAATCATCATCAAACTATTTTCAGTCAGAGATAGTCTTTTTTGGGATAGACAACATCCATGCGATGAGAGACAGCTTTGCTCGGCTCAGAGAATATTTGGACACTCATGGAAGAGCCTCATCAGATGGAATGTCATCATTTTTGAGACATGGTGGGTCAACGTGGGGTGGAGGCAACTTAAGTAGCATGTCTGCTTCAGTGTCAACCCTTGGGGACAGTGGATGGTTACTGCATGTTCAAAATGTTTTGGCTGGTTCAGCTTGGATTGCTGCTCGTATTGCTATGGAAAAGGCTTCTGTTCTTGTGCATTGCAGCGATGGTTGGGATAGAACAAGTCAGTTGGTTGCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCAATGGGTTTCAGGCACTTGTTGAAAAAGATTGGTTAGCATTTGGTCATCCATTTTGTGATCGTGTGGGATTGCCAGCTTTCTCTGGAAGTGAGTTAACTAGGCAGCCTTCATCTAGCAATTTTGCAGCATCACCTGGACGGCAGCCATCAGGAGCATTTACATCTCCGTCGTCTTCTCATGCACAAACTTCTAACAACTACTCTCCCATCTTTTTGCAGTGGGTTGATTGTGTTTCTCAATTGTTGCGGATGTATCCCTTTGCTTTTGAGTTTTCTGCGGCTTTTCTAGTGGACTTCTTAGACAGCATGCTTTCATGTCGTTTTGGAAATTTCTTATGTAATAGTGAGAAGGAGAGGCTACAATGCAATATTTCTGAAACTTGTGGATGTATGTGGGTATACTTGGCTGATTTGCGTGCTTTAGAAGGAGGTTCCCATGTACATTATAATCCTTTCTATGACCCACTGAAGCACAATGGTCCTCTTCTGCCCCCAGCAGCAGCATTAGCCCCAACATTATGGCCCCAATTCCACCTTCGTTGGGCCTGCCCTGAAGAAGCACAAGCTGGGGAGATTGAAGCAAAATGTAGGAAGATAATCACGAAATACACCGAGTTGCAGAAGGCCAAAGAAGTGGCAGAACGTAAATCAAAAGAAATTTCAAATGCCATGGAATCACTGAACGCAGAATTACAAAATTTGAAACAGCAAAACAGCTCAGCTATGAATATGGCCAACAGGGCAAACAAAGAAAACATGTCTATAAAGCGTGCAATTCAGTCAATTGGGTGCAAGGTTCACTTCTCCAATACTGGAGATTGCATTGTGGACATTGAAAGTAATCCATTGGGAACAGCACAAAAATTTTTATATTGCTCCAAGAAAGGATCAGATGGTATCACGCTTGATGACGAAAAGGATCTGGCTGTTGCAGTAACAGTTACAGCCGATGATGACGACAATGATGAGAACAGCCCTATCGGTCGTGTATGTGAGAATCTATGCCCGTTTCGTTCTGCAGATGGAGGCTGCAGATGGCCCAATGGTCGCTGTGCTCAACTAAGCAGCCAGTTCGTTGGTCTTAGGGCAAATTTTGATGCATTTGACAAACTCTCAATTGACGATAGTTATTTCAAGCCCGAGTGA 2538 0.4385 MDVPKHRSGRSTSLRDATDSSKMEGTGSWDALEWTKIEPVSRFVSHTNLDFLLEAEHVIAEGHGVVLVNTDDAGMLMITNFRLLFLSEGTRKVIALGTIPHATIEKFNKTVAKTQSNARQLEKTPPQRLLQVIGKDMRIIVFGFRPRTKQRRIIFDALRRCTKPATLWDLYAFVCGPSRFRNTNPQVRLLDEYFRLLGKGARASTDMIESGSFTLSNDLWRISSINSNYKMCPSYPFALVVPKIISDDEVLLASNFRARGRLPVVSWCHLGTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCSKLDDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFARLREYLDTHGRASSDGMSSFLRHGGSTWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGSAWIAARIAMEKASVLVHCSDGWDRTSQLVALANLLLDPYYRTFNGFQALVEKDWLAFGHPFCDRVGLPAFSGSELTRQPSSSNFAASPGRQPSGAFTSPSSSHAQTSNNYSPIFLQWVDCVSQLLRMYPFAFEFSAAFLVDFLDSMLSCRFGNFLCNSEKERLQCNISETCGCMWVYLADLRALEGGSHVHYNPFYDPLKHNGPLLPPAAALAPTLWPQFHLRWACPEEAQAGEIEAKCRKIITKYTELQKAKEVAERKSKEISNAMESLNAELQNLKQQNSSAMNMANRANKENMSIKRAIQSIGCKVHFSNTGDCIVDIESNPLGTAQKFLYCSKKGSDGITLDDEKDLAVAVTVTADDDDNDENSPIGRVCENLCPFRSADGGCRWPNGRCAQLSSQFVGLRANFDAFDKLSIDDSYFKPE 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02996 845 CDD PTP-MTM-like 260 544 - -
Arst9g02996 845 Gene3D - 64 162 IPR011993 -
Arst9g02996 845 Coils Coil 104 124 - -
Arst9g02996 845 Pfam Myotubularin-like phosphatase domain 186 583 IPR010569 -
Arst9g02996 845 SUPERFAMILY PH domain-like 52 175 - -
Arst9g02996 845 MobiDBLite consensus disorder prediction 1 26 - -
Arst9g02996 845 PANTHER MYOTUBULARIN-RELATED 22 739 IPR030564 -
Arst9g02996 845 Coils Coil 667 715 - -
Arst9g02996 845 SMART gram2001c 41 111 IPR004182 -
Arst9g02996 845 ProSiteProfiles Myotubularin phosphatase domain. 200 642 IPR010569 -
Arst9g02996 845 MobiDBLite consensus disorder prediction 499 524 - -
Arst9g02996 845 ProSitePatterns Tyrosine specific protein phosphatases active site. 437 447 IPR016130 GO:0016311|GO:0016791
Arst9g02996 845 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 214 646 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02996 Arst-Chr9 106605563 106619906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02996 1 845 Protein tyrosine phosphatase (PTP) family AT3G10550 66.706 0.0 1148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02996 K18081 - gmx:100781842 1352.81