Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02975 ATGGACGAAGCACAAGACAACCATGCTATTATTACCAAGAAAAAACCTTCCGCTAATCAGGACATCTCCGATGAGTTAGATCTGAAAATAAAGAAGTATCTCAGAGGAGAAGCTGCTTCTTTTGAGGATTTGAAAGATAGGAAGCTCAAGCGTCAACTATCTGTTAGAGAAGAATTATATGGCAATGCCGCGAAAGCTGCTGCCAAGGCGGAAAAGTGGCTTATGCCTAACGAGGGAGGTTATCTGGAGGCTGAAGGCATAGAGAAGACATGGAGGATCAAACAGGAGGCTATAGCGAAAGAAGTAGGTCTTGTAAACTTAAGGAACCAATACGATATTGTTTTACCAGATCTTGGTCCATATACCCTGGATTTTACTTCAAGCGGCCGTTATATGGCTGTTGGTGGTCGTAAAGGCCACCTTGGAATTGTGGACATGATAAATCTTAACCTAATCAAAGAGATTCAGGTAGCAGAAACAGTGCGTGATGTGGTATTCTTGCATAATGAGCTCTTTTTCGCTGCTGCCCAGAAGAAGTTTGTTTACATGTATAATCGAGACGGAACTGAAATTCGCTGCCTCAGGGAACATGGTGCAGCATTAAAGCTTCAGTTTCTGAAAAACCATTTTCTGTTGGCTTCAGTCAACAAATTTGGGCAACTTCATTATCAAGATATTACAATGGGTGAGATTGTGGGTAATTTTCGAACAGGCCTGGGACGCACAAATGTGATGCAAGTGAACCCCTTCAATGCAGTTGTTGGTCTGGGTCACGCAGGTGGTACAGTTACAATGTGGAAGCCAACTAGTTCTGCTCCCCTTGTGAAAATGCTATGTCATCATGGGCCTGTTTCAGCACTAGCATTCCACCCTAATGGCCACTTAATGGCCACAGCGGGTAAAGAGAAGAGGATTAAGCTTTGGGACTTGAGGAAATTTGAGCCTCTTCAAACGTTAACGGGCCACGCAAACACACTGGATTTTAGTCAAAAGGGCTTGCTTGCTTGTGGTGTTGGTTCGTTTGTACAGGTTCTGAATGATGTTTCTGGGACGCAGAACTATTCTAAGTACATGACTCATTCGATGGCGAAAGGTTACCAGATAGGAAGATTAGCTTTTCGGCCGTATGAAGATGTTCTAGCCATTGGCCATTCCATGGGTTGGTCTAGTATTCTTATTCCAGGTGCCGGAGAACCCAACTTCGACACATGGGTTGCCAATCCATTTGAAACATCTAAACAGCGGAGAGAGAAGGAAGTGCGGTCTCTTCTTGATAAACTTCCACCTGAGACTATCATGCTGGATCCAAGCAAGATTGGTACGGTGAAATCAACGTATAGAGAGAAACCGACAAAGCAAGAGAGGGAGGCTGAAGTTGAAGCCGCAGTTGAAGCTGCCAAGGGCACAAAACTGAAGAACAAAACAAAAGGAAGAAATAAGCCAGGTAAAAAGATACAGAAGAAGCAGGATGCAATTGCTAGAGTGAAGAGGCCTTACTTAGAGGAGAAGATTAACGAGGAACAAAAGATATCCCATAAGAAGCAGAAAACTGGTGAGAACATTGATTTACCAAAATCTTTACAGAGGTTTGCTCGTAAGAAATCATCATGA 1611 0.4339 MDEAQDNHAIITKKKPSANQDISDELDLKIKKYLRGEAASFEDLKDRKLKRQLSVREELYGNAAKAAAKAEKWLMPNEGGYLEAEGIEKTWRIKQEAIAKEVGLVNLRNQYDIVLPDLGPYTLDFTSSGRYMAVGGRKGHLGIVDMINLNLIKEIQVAETVRDVVFLHNELFFAAAQKKFVYMYNRDGTEIRCLREHGAALKLQFLKNHFLLASVNKFGQLHYQDITMGEIVGNFRTGLGRTNVMQVNPFNAVVGLGHAGGTVTMWKPTSSAPLVKMLCHHGPVSALAFHPNGHLMATAGKEKRIKLWDLRKFEPLQTLTGHANTLDFSQKGLLACGVGSFVQVLNDVSGTQNYSKYMTHSMAKGYQIGRLAFRPYEDVLAIGHSMGWSSILIPGAGEPNFDTWVANPFETSKQRREKEVRSLLDKLPPETIMLDPSKIGTVKSTYREKPTKQEREAEVEAAVEAAKGTKLKNKTKGRNKPGKKIQKKQDAIARVKRPYLEEKINEEQKISHKKQKTGENIDLPKSLQRFARKKSS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02975 536 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 277 311 - -
Arst9g02975 536 SMART WD40_4 106 145 IPR001680 GO:0005515
Arst9g02975 536 SMART WD40_4 228 267 IPR001680 GO:0005515
Arst9g02975 536 SMART WD40_4 312 346 IPR001680 GO:0005515
Arst9g02975 536 SMART WD40_4 148 185 IPR001680 GO:0005515
Arst9g02975 536 SMART WD40_4 270 309 IPR001680 GO:0005515
Arst9g02975 536 MobiDBLite consensus disorder prediction 484 520 - -
Arst9g02975 536 Gene3D - 240 394 IPR015943 GO:0005515
Arst9g02975 536 PANTHER WD-REPEAT PROTEIN BING4 7 532 IPR040315 -
Arst9g02975 536 MobiDBLite consensus disorder prediction 469 536 - -
Arst9g02975 536 Gene3D - 105 239 IPR015943 GO:0005515
Arst9g02975 536 Pfam BING4CT (NUC141) domain 357 435 IPR012952 -
Arst9g02975 536 SUPERFAMILY WD40 repeat-like 117 385 IPR036322 GO:0005515
Arst9g02975 536 FunFam U3 small nucleolar RNA-associated protein 7 109 391 - -
Arst9g02975 536 ProSiteProfiles Trp-Asp (WD) repeats profile. 277 318 IPR001680 GO:0005515
Arst9g02975 536 SMART BING4CT_2 356 436 IPR012952 -
Arst9g02975 536 Pfam WD domain, G-beta repeat 278 309 IPR001680 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02975 119 332 U-box Gene Family AT2G33340 24.779 1.72e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02975 K14768 - gmx:100802940 874.774