Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02968 ATGAACTGTCTTCAGAATCTTCAGCGATCCTATGTTTTGCCCTTACAAGTATCCACGCGCCACCACAGGAACCATCCTTTCTGTTCTGTTTCACTGGGAATCAGCAAGAGTTCTCATCAGAATCGAAGTATGGCAATTAAGTCTGCTTCTGGTTCCATACCAAGTGCAGAGACCAGTAGTTTTGATATGAAAGAGGAAAAGTCTGAGACATATAGTAACAACATGACAGAAGCCATGGGTGCTGTTTTGACATATAGGCATGAATTGGGAATGAACTACAACTTCATCCGTCCAGACTTGATAGTAGGATCATGCCTACAGACTCCCGAAGATGTTGACAAACTTCGGAAAATTGGAGTGAAAACTATATTTTGCTTGCAACAAGATCCAGACCTAGAATATTTTGGAGTTGATATCAATGCCATACGAGAATATGCCAAGGCGTGCGGTGACATTCAGCACTTGCGTGCTCAGATAAGAGACTTTGATTCATTTGATTTACGGATGCGTCTCCCAGCTGTAGTTAGCAAATTATACAAGGCAATAAATTCCAATGGAGGGGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCCGTTGCGTTGGCATATATGTTTTGGGTTCAGGGTTATAAACTCAATGAGGCTTATAAACTTCTCCTGAGCAAAAGGCCATGCTTTCCGAAACTGGATGCCATTAAAAGTGCGACTGCTGACATTCTTACAGGCCTCAGTAAGAAGTCTGTCACTTTATCATGGGAAGGCAGTAATTGCTCTTCAGTGGAAGTTTCAGGACTCGATATCGGATGGGGGCAGAGAATGCCCTTAGATTTTGATGACAAGCAAGGTTTGTGGTCTCTCAAGAGGGAATTGCCTGAAGGGCACTATGAATACAAGTATATAGTTGATGGGAAATGGATATGCAACAAGAATGAGCTTATAACTTCTCCCAACAAAGATGGCCATGTCAACAATTTTCTTGACGTCCTTCATGATCCCAGCAGTGTTGGTGCATTGCTTAGGGAGAGATTGACTGGTGATAATCCTGATCTCACAAAGGACGAAAGGCTGAGAATAAGAGAGTTTCTTGAAGCCTATCCTGATGAGACTGAGCAGTGA 1128 0.4282 MNCLQNLQRSYVLPLQVSTRHHRNHPFCSVSLGISKSSHQNRSMAIKSASGSIPSAETSSFDMKEEKSETYSNNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDINAIREYAKACGDIQHLRAQIRDFDSFDLRMRLPAVVSKLYKAINSNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEAYKLLLSKRPCFPKLDAIKSATADILTGLSKKSVTLSWEGSNCSSVEVSGLDIGWGQRMPLDFDDKQGLWSLKRELPEGHYEYKYIVDGKWICNKNELITSPNKDGHVNNFLDVLHDPSSVGALLRERLTGDNPDLTKDERLRIREFLEAYPDETEQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02968 375 MobiDBLite consensus disorder prediction 45 59 - -
Arst9g02968 375 Pfam Dual specificity phosphatase, catalytic domain 135 230 IPR000340 GO:0008138|GO:0016311
Arst9g02968 375 Gene3D Protein tyrosine phosphatase superfamily 85 365 IPR029021 -
Arst9g02968 375 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 169 228 IPR000387 GO:0016311|GO:0016791
Arst9g02968 375 SMART dsp_5 92 242 IPR020422 GO:0006470|GO:0008138
Arst9g02968 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 85 267 - -
Arst9g02968 375 MobiDBLite consensus disorder prediction 45 68 - -
Arst9g02968 375 CDD E_set_AMPKbeta_like_N 251 332 - -
Arst9g02968 375 CDD DSP_laforin-like 91 238 IPR045204 GO:0019203
Arst9g02968 375 ProSiteProfiles Dual specificity protein phosphatase domain profile. 92 249 IPR020422 GO:0006470|GO:0008138
Arst9g02968 375 Pfam Glycogen recognition site of AMP-activated protein kinase 252 334 IPR032640 -
Arst9g02968 375 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 3 372 - -
Arst9g02968 375 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 89 234 IPR029021 -
Arst9g02968 375 SUPERFAMILY E set domains 251 332 IPR014756 -
Arst9g02968 375 Gene3D Immunoglobulins 247 337 IPR013783 -
Arst9g02968 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 247 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02968 Arst-Chr9 105970013 105975434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02968 91 368 Protein tyrosine phosphatase (PTP) family AT3G52180 70.144 5.21e-151 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02968 - - gmx:100804010 620.157