Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02961 ATGAGTGAAGAGGAACTAGGTACTTTCTCAATGATGGATCCTTTGGATATGATAGATCCTTGGGATATGATAGACTGGGATGCGGATAGAAGGAATATGGTAGAGCAGTGTGCCATTGACGTGGGTGGCAATCAACCACCTCAGCCCAAGCCGCAGCCGGATGTAAGGGAGATTACAGTAGCTCAGTTTTTCAGTGACACGTGTGGTAATCCTCAGTTCGATATGGTTCTTGCTGAGTGTTTGCCAGAACCTCAGCCTCAGCCTCAGCCTCAGCCTCAGTCCCACCCTCATCCTCAGCAGTTTCAGCAGTTTCTTGCTGATTGTGGTTATCAACTACCTGAGTCTCAGCTTCAGCTCCAACCTATGCAACCTCAGGTCTGGACTTGGGAGGAGAACAAAGCCTTTGAGTCAGTTATTACCAATTGTTTTGAGTATGCTAAACGCAATTCCTGGGAGCTCATTGCTGCTCGTCTCCCTGGAAAGACCCCGGCTCAACTGCAAGAACGCTTCAAGAAGCTGATGAAGGACATCAATGTCATCCATAACGGTTATACTTCAAACACTCCTCTGAATACTGCATCTGAGAACATGACTATGATAATGGCTGCTCCTATCACCACATTGGAACACAACCCTGTCTCCGTCCCCATCATCAATGCAACAACAACAACCCCACCACCACCGCCTTATAACACTGATCATCAACATCACAGGGCGGAGGTAGTCGCGGCCGCAGCACCAATGGAGGCAGCAACAAGGGAACAAAGCCAATCTGCTAACACCAACAATACAAAGAAATATTCTCGGTGGACTGAAGATGAGCATAGATTATTTGTTAGAGGCTACCAAGCAGAAGGTACAAATTGGTCAAGAATTTCAGAATATTATGTCAAAACAAGAACTTATCATCAAATTAGCAGTCATGCTCAGAAATACTTTAGACATAAAGAAAGATTAGCTAAAGGAGAAAAGTTAAGAAAAAGCATTTATGATGTAATTTGA 1002 0.4471 MSEEELGTFSMMDPLDMIDPWDMIDWDADRRNMVEQCAIDVGGNQPPQPKPQPDVREITVAQFFSDTCGNPQFDMVLAECLPEPQPQPQPQPQSHPHPQQFQQFLADCGYQLPESQLQLQPMQPQVWTWEENKAFESVITNCFEYAKRNSWELIAARLPGKTPAQLQERFKKLMKDINVIHNGYTSNTPLNTASENMTMIMAAPITTLEHNPVSVPIINATTTTPPPPPYNTDHQHHRAEVVAAAAPMEAATREQSQSANTNNTKKYSRWTEDEHRLFVRGYQAEGTNWSRISEYYVKTRTYHQISSHAQKYFRHKERLAKGEKLRKSIYDVI 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02961 333 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 123 332 IPR043363 -
Arst9g02961 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 262 317 IPR017930 -
Arst9g02961 333 Pfam Myb-like DNA-binding domain 125 173 IPR001005 -
Arst9g02961 333 Pfam Myb-like DNA-binding domain 269 313 IPR001005 -
Arst9g02961 333 SUPERFAMILY Homeodomain-like 264 318 IPR009057 -
Arst9g02961 333 ProSiteProfiles Myb-like domain profile. 262 313 IPR001005 -
Arst9g02961 333 Gene3D - 269 318 - -
Arst9g02961 333 NCBIfam myb-like DNA-binding domain, SHAQKYF class 265 316 IPR006447 GO:0003677
Arst9g02961 333 ProSiteProfiles Myb-like domain profile. 127 174 IPR001005 -
Arst9g02961 333 SUPERFAMILY Homeodomain-like 125 181 IPR009057 -
Arst9g02961 333 CDD SANT 127 174 IPR001005 -
Arst9g02961 333 CDD SANT 269 313 IPR001005 -
Arst9g02961 333 Gene3D - 122 186 - -
Arst9g02961 333 SMART sant 123 176 IPR001005 -
Arst9g02961 333 SMART sant 266 315 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02961 Arst-Chr9 105912579 105917333 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Arst9g02961 Myb_DNA-binding 5e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02961 - - ahf:112765153 392.889