Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02946 ATGACAGATGTTCAGCCGCTACAGCAGAAGCCTGAGTCTGCCGATGCTCATGCTGAGTTCGAGCGTGGACTGGAGGACTTTATGCGTGGGCAGTTGGATGATTGTATGTCATTTGCCTCCTGTAGTTCCTCCCAGGCTCAGGGGGATGAGGAAGATGAGGGTGATCAGCTCGCTCGGAGGAGGCGTAGGTCTGATCTTGAAGGGGATGATTTGGCGGAGTCCTCGGCTGCACAGAGGCGCCACTCGCAGTCTGAGTTGATGGCGCTGGCTGGGTTGCACACGGTGTCTATGTTGGACTCCTCTTTCTTGTGGGGATCACAGTCCCCAACTTCTGGACAGGAGGGTGCCGTGGAGAGACCGAGCACTCAGGCATCTGCTATTCTGCAGATGTGGCGCGAATTGGAGGATGAGCATTTGTTGAACAGGGCTCGTGACAGGATGAGGGAAAGGTTGAGGCAACAGAGGGGTTCTGAGTCTAATACCAATGGATCCAGTACCATGTCTGATAGTCGAGGCAGTGAGAATCAAGGCAGTTTGGGGGATGCGAGTGAAAGCGAAAATGATTTTGGTACTTGGTCGCATGATCGGATTGAATCGCGGAATGCACGTGGGGATCATCTTGTCTCAAGCAGGGAGCAATCTCCTGATCTTGGCGAAGTCGAGAGGGAGAGAGTTAGACAGATTGTTCGAGGATGGATGGAAAGCGGTATTGGTGATCATTCATCGAATGTGAATCAGAGAAACAATAATGGTAGAGCAGAATGGCTTGGAGAAACAGAGCGTGAGAGGGTAAGAATTGTCAGGGAATGGGTGCAAATGACTAGCCAACAGAGAGGCTCACGTGGGAGCCGGAGGGATGCTAAAGTCGATCGAGCGCGCGATGTGGTTGCTGATCACGATGAAGGCCAGCCAGAGCATGTTCGGCGGGACATGTTGAGGCTGCGTGGAAGACAAGCTCTAGTTGATTTGCTTGTGAGGATAGAGAGGGAAAGGCAAAGAGAGCTGCAGGGATTGTTGGAGCACCGAGCTGTATCTGATTTTGCTCACCGCAACCGCATTCAGTCTTTGCTCAGAGGTAGATTCCTCCGAAATGAAAGAACTGTTGAAGATGAGAGACCTCCGTCTATGGCTGCAAGTGAATTAGTGCAGTTGAGACAACGACATACAGTCTCTGGTATAAGGGAGGGGTTTCGTTCAAGATTAGAGAATATTGTTCGTAGTCAAGCAAGTACCAATTCTGATACTGCATCAAATAGTAACATTAGTGAAAGTGATGGGAGCCAAGCAAACAACCTGTTGGATGCCCAACAAGAAAATTATGAACAAGAGCAGATTAGGAACTTGGAATCTGATGTCCGTCAGTTGCCTAGTCAAACAGGAACTGTGGAGGGTAGCACAAATGAGAGTATTAGTTGGCAAGAAGGTGGTAATCAAGGAGGAAATCGGCAGGAACAGATTACTGAAGATGCAGAAGGAAACTGGCAGCAGAGTACCTATGATTGGCCACAAGAAACTCCCAGAAATTTAGCTGGGGAAGACACACATCCACGAGAAGCACAGAGAGTGTGGCATGAGGATAGTTCAAGGGAAACTGTTGGTAATTGGTCTGAAGGACCTTCTGTAGCTCCAAGGAATCGCCGTGGTGTTCCTATTAGAAGATTCAATAGATTTCATCCACCCGATGATGATAACGTGTACAGCATGGAGCTTAGAGAGCTGCTAAGCAGGAGAAGTGTTTCTAATCTTCTTCGCAGTGGCTTCCGTGAAAGTCTTGACCAATTAATTCAGTCATATGTGGAAAGGCAAGGTCGTGCACCAGTTGACTGGGATTTGCATAGGAACTTGCCCATACCAACTCCTGCCTCAACTGAACAGGACACTGATCAGCAAGGGGATGAACGCAATGAGGGTCGGCATGAAGGTATCAACAGACCTACGCTGGTGATGCCGTCACCTCCAGTACCTCCACCACAACCACTGTGGCACCAGGATCTCCATCAAACTGGATGGTCTCGCCATAGCATGCATCGTTCTGAAATCGAATGGGAGATAATGGAATTCATTAAGGATAGTGAAGCTTTGTTGGTGGAACTCATTTGATTGTTAGATAAATGTCTCTTTACTTTTCTCTTCATTCATGTAACTTATTAACTCAACGTAGGCATGGTTGCTGAGACATCTGATGATGGGTCCAAGTGGGGGCATGTGAAAAAGGGAACTTGCTGCGTTTGTTGCGATAACCATATCGATTCACTTCTGTATAGATGCGGGCACATGTGCACTTGCTCAAAATGTGCCAATGAGTTAGTTCGTGGCGGAGGTAAGTGTCCTTTATGCCGAGCACCGATTGTTGAGGTGGTCCGAGCATATTCCATACTGTAA 2382 0.484 MTDVQPLQQKPESADAHAEFERGLEDFMRGQLDDCMSFASCSSSQAQGDEEDEGDQLARRRRRSDLEGDDLAESSAAQRRHSRXSELMALAGLHTVSMLDSSFLWGSQSPTSGQEGAVERPSTQASAILQMWRELEDEHLLNRARDRMRERLRQQRGSESNTNGSSTMSDSRGSENQGSLGDASESENDFGTWSHDRIESRNARGDHLVSSREQSPDLGEVERERVRQIVRGWMESGIGDHSSNVNQRNNNGRAEWLGETERERVRIVREWVQMTSQQRGSRGSRRDAKVDRARDVVADHDEGQPEHVRRDMLRLRGRQALVDLLVRIERERQRELQGLLEHRAVSDFAHRNRIQSLLRGRFLRNERTVEDERPPSMAASELVQLRQRHTVSGIREGFRSRLENIVRSQASTNSDTASNSNISESDGSQANNLLDAQQENYEQEQIRNLESDVRQLPSQTGTVEGSTNESISWQEGGNQGGNRQEQITEDAEGNWQQSTYDWPQETPRNLAGEDTHPREAQRVWHEDSSRETVGNWSEGPSVAPRNRRGVPIRRFNRFHPPDDDNVYSMELRELLSRRSVSNLLRSGFRESLDQLIQSYVERQGRAPVDWDLHRNLPIPTPASTEQDTDQQGDERNEGRHEGINRPTLVMPSPPVPPPQPLWHQDLHQTGWSRHSMHRSEIEWEIMEFIKDSEALLVELIXLLDKCLFTFLFIHVTYXLNVGMVAETSDDGSKWGHVKKGTCCVCCDNHIDSLLYRCGHMCTCSKCANELVRGGGKCPLCRAPIVEVVRAYSIL 794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02946 794 SUPERFAMILY RING/U-box 741 787 - -
Arst9g02946 794 CDD mRING-HC-C3HC5_NEU1 739 791 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 52 80 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 628 642 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 611 664 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 157 188 - -
Arst9g02946 794 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 725 792 IPR013083 -
Arst9g02946 794 MobiDBLite consensus disorder prediction 103 125 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 511 532 - -
Arst9g02946 794 ProSiteProfiles Zinc finger RING-type profile. 742 781 IPR001841 -
Arst9g02946 794 MobiDBLite consensus disorder prediction 1 26 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 38 83 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 405 547 - -
Arst9g02946 794 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 88 688 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 189 223 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 405 505 - -
Arst9g02946 794 Pfam Zinc finger, C3HC4 type (RING finger) 739 786 - -
Arst9g02946 794 MobiDBLite consensus disorder prediction 143 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02946 Arst-Chr9 105600024 105605371 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02946 742 788 C3H Transcription Factor Family AT3G06140 42.553 9.80e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02946 - - gmx:100805607 1231.08