Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02917 ACAGCCACACACACCCCACCACCACCGCCGCCGCCACTGCCGTCTCTACCTTCATTGACACAAGCAGGACCATCAGGAGGAGTATCAGCATCTGCACCTTCACCATCTGCTTCACCTTCTTCTCCTGCTATTGTTGCTACTACTGCTGTGGCTACTGCAGTTGCTGCTCCTCCTACCTCTCTTGCTCCTGGTTTCAGGTTCCATCCTACTGATGAGGAACTTGTTATCTATTACCTCAAGCGCAAGGTTTGCGGCAAAAGCTTCCGATTTGATGCAATTTCTGAGGTTGACATCTACAGGAGCGAACCCTGGGACCTTGCAGATAAGTCGAGGTTGAAGACTAGGGACCAAGAATGGTACTTCTTTAGTGCACTGGACAAGAAGTATGGCAATGGTGGGAGGATGAACAGGGCCACAAGCAAAGGATACTGGAAGGCTACAGGGAACGATCGTCCGGTTAAGCATGAACAAAGGACTGTGGGGTTGAAGAAAACTCTGGTGTTCCATAGTGGAAGAGCCCCAGATGGTAAGAGGACCAATTGGGTCATGCATGAGTACCGACTCGTCGACGAAGAGCTGGAGAGGGCTAGGTCTGGATCCTCTCAGCCTCAGGATGCATATGTTTTGTGTAGAGTTTTTCACAAAAATAACATAGGACCTCCGAATGGGCAACGTTATGCACCTTTCGTTGAAGAGGAGTGGGATGATGCATCGGCATTGGTTCCTGGGGCAGAACCTGTGGAGGATGTTACCGTCACTGTTGCCCATCCTCTACGCATTGAAAGCAACGGTCGCACTTTATGCAGCGACAGGAGAAACAATGTTGCACAGGATACTCAATCTAACAACAAAGTTCCATTTGATGTGAACAAGCTTCCCATTGAAACTCAAAGTCTGCTAGCTGTCTGCAAAAGGGAGAGTATGGCCGAGTTTCCATCACCTGAAAAGGAGGATAACTCGAAGCGTCAGATCGATGAGTATCCTTTGCCACAAACAGAAAACACCAAGCCTATCTCTCAAATATACAAGAGGAGGAGGCATTATTTGAATGTCAACCATTCAAATGTTAACGGAGATTCAGTCCGAACCATCCAAGAACCGCCATGTTCATCAACAATAACCACCGCCGCAACGACACTCCCGACGGTCGCCACCACAGCCTCCACTGCAATAACCAACGTTGCACCTAAAAAACATTTCTTGTCTGCACTGGTGGAGTTTTCTTTGATGGAATCCCTCGAATCAAAGGGAAATGCATCCGTTCAACCACCAGAGTTTGATGATGCTTCCTTGGAGGCATCCGTGCCGCCAAATTGTGTTAAGCTCATCAAACGCATGCAGGGCGAGATTTACAAACTTTCCGAGGAAAGGGAGACTATGAGGTTTGAGATGATGAGCGCACAAGCAATGATTAACATGCTCGAGTCGCGCATTGAAATTTTGAGCAAAGAAAATGAGGAACTGAAGAGCATGATTAATAACAATCCTTAG 1491 0.4775 MGRETLLHPPPPSTTAPTATHTPPPPPPPLPSLPSLTQAGPSGGVSASAPSPSASPSSPAIVATTAVATAVAAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVKHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERARSGSSQPQDAYVLCRVFHKNNIGPPNGQRYAPFVEEEWDDASALVPGAEPVEDVTVTVAHPLRIESNGRTLCSDRRNNVAQDTQSNNKVPFDVNKLPIETQSLLAVCKRESMAEFPSPEKEDNSKRQIDEYPLPQTENTKPISQIYKRRRHYLNVNHSNVNGDSVRTIQEPPCSSTITTAATTLPTVATTASTAITNVAPKKHFLSALVEFSLMESLESKGNASVQPPEFDDASLEASVPPNCVKLIKRMQGEIYKLSEERETMRFEMMSAQAMINMLESRIEILSKENEELKSMINNNP 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02917 513 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 77 338 - -
Arst9g02917 513 MobiDBLite consensus disorder prediction 36 59 - -
Arst9g02917 513 FunFam Nac domain-containing protein 86 87 235 - -
Arst9g02917 513 Gene3D NAC domain 87 235 IPR036093 GO:0003677|GO:0006355
Arst9g02917 513 SUPERFAMILY NAC domain 68 233 IPR036093 GO:0003677|GO:0006355
Arst9g02917 513 MobiDBLite consensus disorder prediction 1 59 - -
Arst9g02917 513 MobiDBLite consensus disorder prediction 326 355 - -
Arst9g02917 513 MobiDBLite consensus disorder prediction 10 35 - -
Arst9g02917 513 Pfam No apical meristem (NAM) protein 80 205 IPR003441 GO:0003677|GO:0006355
Arst9g02917 513 ProSiteProfiles NAC domain profile. 78 232 IPR003441 GO:0003677|GO:0006355
Arst9g02917 513 MobiDBLite consensus disorder prediction 326 341 - -
Arst9g02917 513 Coils Coil 481 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02917 Arst-Chr9 105058735 105065018 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02917 421 506 NAC Transcription Factor Family AT3G10480 41.111 1.90e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Arst9g02917 NAM 5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02917 - - adu:107466647 907.901