Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02911 ATGGAAACACCAGAGGAACTCACCTTGGGTTCCAAAGACCATACCAACATCGTCAAAGGCAAGAGAACAAAGAGGGTAAGGCCTCAATCCCCCATCCCCTTCTCCATCACGGCAGCAGAAGAAGAAGGAGGGGAGAATAATATACCATCGCAACAACAAGAAGAAGAAAAAGAAGATATTATTTACAATGCGAATGCGAATGGCAACACAGCAACTACTTCTTCCGTGGGTCCACGAGACAGCACGGAAGAAGAGGAGGACATGGCCAACTGCCTCATCCTGTTAGCACAAGGACAATCCAGGGAATCCCCAAGACGCCCGGCCGCCGTAGCAGAAGAAGAAGGAGGAGGAACAAGCTACAACAAGTACAGCAGTAGGAAGTTTCTAGAAGCTGCCGGAGTCGGCGTTGGGTACGGAGGAGGAAGAACAGGAGGATATTATGTATACGAGTGCAAAACATGTAACAGGACATTTCCATCTTTTCAAGCACTTGGTGGACACAGGGCAAGCCACAAGAAACCCAAGGCCGCCATTCCTGCAATCTCCATTCACCAAGAAAGAAAACAACCACCGCCATTGTTCTCCTCCGACGAAGAAGAGTTCCAATTCAAGAACACCACCGCCAACAAATCAAGCTTCCTCCAGTTGAACACAAGAGGGAATAATTTGTATAGCAATAACAATAACAAATCCAAGGTTCACGAATGTTCCATTTGCGGAGCTGAATTTACATCTGGACAGGCACTTGGTGGACATATGAGGCGGCACCGAGCTCCGGTGGGGACTAACACTAACACTAACACTAACACCACGCTTTCGCTGACCACCACCACCACGGCGGCCGCGATGGAAGCAGATGAGGAGCAGCCTAAGAAGAAGACGAAGGTGTTGTCTTTGGATTTGGATCTCAACCTTCCGGCACCGGAAGATCAAGATCAAAGGGAATCCAAGTTTGCCTTTGTATCCAAGCAACCACCAACGCAACCGCAACCGCAACCGCAGAAGCAGCAACCACAAACAAGTCTTGTCTTCTCTACTACACCAGCTTTGGTGGATTGTCATTACTGA 1068 0.4878 METPEELTLGSKDHTNIVKGKRTKRVRPQSPIPFSITAAEEEGGENNIPSQQQEEEKEDIIYNANANGNTATTSSVGPRDSTEEEEDMANCLILLAQGQSRESPRRPAAVAEEEGGGTSYNKYSSRKFLEAAGVGVGYGGGRTGGYYVYECKTCNRTFPSFQALGGHRASHKKPKAAIPAISIHQERKQPPPLFSSDEEEFQFKNTTANKSSFLQLNTRGNNLYSNNNNKSKVHECSICGAEFTSGQALGGHMRRHRAPVGTNTNTNTNTTLSLTTTTTAAAMEADEEQPKKKTKVLSLDLDLNLPAPEDQDQRESKFAFVSKQPPTQPQPQPQKQQPQTSLVFSTTPALVDCHY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02911 355 MobiDBLite consensus disorder prediction 63 78 - -
Arst9g02911 355 MobiDBLite consensus disorder prediction 1 84 - -
Arst9g02911 355 PANTHER ZINC FINGER PROTEIN ZAT5 70 326 - -
Arst9g02911 355 Pfam C2H2-type zinc finger 148 174 - -
Arst9g02911 355 Pfam C2H2-type zinc finger 233 259 - -
Arst9g02911 355 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 176 IPR013087 -
Arst9g02911 355 SUPERFAMILY beta-beta-alpha zinc fingers 148 256 IPR036236 -
Arst9g02911 355 ProSitePatterns Zinc finger C2H2 type domain signature. 236 256 IPR013087 -
Arst9g02911 355 MobiDBLite consensus disorder prediction 302 344 - -
Arst9g02911 355 Gene3D Classic Zinc Finger 147 256 - -
Arst9g02911 355 ProSiteProfiles Zinc finger C2H2 type domain profile. 234 256 IPR013087 -
Arst9g02911 355 SMART c2h2final6 149 171 IPR013087 -
Arst9g02911 355 SMART c2h2final6 234 256 IPR013087 -
Arst9g02911 355 MobiDBLite consensus disorder prediction 99 118 - -
Arst9g02911 355 ProSitePatterns Zinc finger C2H2 type domain signature. 151 171 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02911 Arst-Chr9 104885178 104886472 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02911 1 355 C2H2 Transcription Factor Family AT5G04390 42.674 6.32e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst9g02911 zf-C2H2_6 7.1e-13 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02911 - - gmx:100799383 365.155