Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02904 ATGTTTTCAAGGTTGGTACATCCCTGCGGCGGTGGCGGTGATGGCGACGGAGTGGAAGAGATGATGGTGCAGGGCGGAGGAGGAGGAGGAGGAGGAGGAGGTGGAGAGCCGTCTCTGGTTTTGACCTCTGATCCGAAGCCTCGGCTTCGTTGGACCACGGACCTCCATGAACGCTTCGTTGATGCTGTCACTCAACTCGGCGGTGCCACCAAAGCCACACCAAAAGCGATTTTGCGGACAATGAATGTCAAGGGTTTGACTCTATATCACTTAAAGAGTCATCTGCAGAAATACAGGCTTGGTAAGCAATCTGGAAAAGATTTTGATGAGGGATGCAAAGATGCTTCGTACCCTCTGGAAAGCCCCAGTACAAATAACTCATCTCCTAAGGCGTCTTATGATGCAAATGAGGGCCAAGAAGTAAAGGAAGCATTAAGGGCACAAATGGAAGTGCAAAGTAAACTACATTTGTTAGTGGAGGCAGAGAAGCACTTGCTAATTTGCCAGGATGCTGAACAGACATATATGGTCATGCTTGAGAGAGCTTGCAAGATGCTGGCTGATCAAATTATTAGCAATCCAATGGTCGACACAGGCAGCCAAAGGTTGGAAGGATTGCATGTTTCGGAAGTGCTGGTGCCTTCGCTTATTCTGCTGCCCCAGGGAACTGAAAGCTGCCTAACATCACTTGAGAATCTCGGCGGATTGACGCTGGAGGGATCTCCAAGCGGGGCAAGGAAGAGAATTCTGAATTTAGACTCAGTGGTAGCTCCTTTGATGTGGAACGAAGCTAACATGAGAACTCAGGGTATCCATTCAAGTCAAGTGAATCCTCATCACGAAATAACTGGGTATGGTATGTAG 864 0.485 MFSRLVHPCGGGGDGDGVEEMMVQGGGGGGGGGGGEPSLVLTSDPKPRLRWTTDLHERFVDAVTQLGGATKATPKAILRTMNVKGLTLYHLKSHLQKYRLGKQSGKDFDEGCKDASYPLESPSTNNSSPKASYDANEGQEVKEALRAQMEVQSKLHLLVEAEKHLLICQDAEQTYMVMLERACKMLADQIISNPMVDTGSQRLEGLHVSEVLVPSLILLPQGTESCLTSLENLGGLTLEGSPSGARKRILNLDSVVAPLMWNEANMRTQGIHSSQVNPHHEITGYGM 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02904 287 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Arst9g02904 287 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Arst9g02904 287 Gene3D - 45 103 - -
Arst9g02904 287 MobiDBLite consensus disorder prediction 111 137 - -
Arst9g02904 287 MobiDBLite consensus disorder prediction 1 36 - -
Arst9g02904 287 FunFam Myb family transcription factor 45 103 - -
Arst9g02904 287 MobiDBLite consensus disorder prediction 118 134 - -
Arst9g02904 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Arst9g02904 287 Pfam MYB-CC type transfactor, LHEQLE motif 140 185 IPR025756 -
Arst9g02904 287 SUPERFAMILY Homeodomain-like 46 102 IPR009057 -
Arst9g02904 287 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 23 211 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02904 Arst-Chr9 104797279 104799218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02904 35 208 G2-like Transcription Factor Family AT3G24120 53.846 1.04e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Arst9g02904 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02904 - - adu:107466668 554.288