Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02873 ATGAACAACACTTCCAATTCTACTGAGGACTCTCAAGAGGACATAACCGGATACACGTATTATTCGGTTTCTTTGTCTCTTGGCTTCCTCCTCTTGATGGCATTCATAGCTCTCACTGCATACTACTGCAGCAAAAGCAGGATTCGAGACGAGCGAACCGGACCAAGCTCCGGAAGAACCAATAGCAGTTTCAATTCAAACAGGACAGTGATCATGGACAGAGACCCATCCTCTATAACAATCCAAATTGGTGAGGAGCAACAACAAATGCAAGAATCAATCCTCAAAAGTTATCCTATGTTGTTGTTCTCCCAAGCCAAGCTTCATCAAAAGGCAGATGATCCAACAGAACTTCTTAGTTGCTCAATATGTTTGGCAGATTATGCAGACTCAGAGTGGTTACGGCTATTACCTGATTGTGGCCATTTTTTTCATAGGGATTGTATTGATGTATGGTTGAGGCTAAACCTTTCTTGTCCAATGTGTAGGAACTCTCCATTACCCACCCCTCTTGCTGAAGTTGCTGCCTTGGCCGCTACAAGGGCTTATTGA 552 0.4366 MNNTSNSTEDSQEDITGYTYYSVSLSLGFLLLMAFIALTAYYCSKSRIRDERTGPSSGRTNSSFNSNRTVIMDRDPSSITIQIGEEQQQMQESILKSYPMLLFSQAKLHQKADDPTELLSCSICLADYADSEWLRLLPDCGHFFHRDCIDVWLRLNLSCPMCRNSPLPTPLAEVAALAATRAY 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02873 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 78 167 IPR013083 -
Arst9g02873 183 CDD RING-H2_EL5-like 120 163 - -
Arst9g02873 183 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Arst9g02873 183 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 173 IPR045899 -
Arst9g02873 183 SUPERFAMILY RING/U-box 95 166 - -
Arst9g02873 183 SMART ring_2 121 162 IPR001841 -
Arst9g02873 183 Pfam Ring finger domain 120 163 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02873 Arst-Chr9 104270805 104271356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02873 11 178 C3H Transcription Factor Family AT5G06490 34.270 1.89e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02873 - - adu:107466513 326.635