Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02872 ATGATAATTAATAACTCCAACGACAGTGCTTTTCGTTTCACTCATGCCATGGCATTCATATTTGGCTTGATATTCTTGTTTAAGACCATAAATTTCTTACATTCTTGCTTTTTCAGGCCTCCAAGAACTCCCACCATACTCCACACACCGGTCGATGTTCCATCACCTTACGTGTCCGTGTCAGTGGCTGAGTCCTTAGAGCACGGTCACTGCCACGGCCACGTAGACGGTCACATCGACACGGGTTACGAGAATTCCCCTAAGATGTCATATTCTGATGAAGTAATGAAGAAAAGTAGTGTTGGAGGTGGATGCATCATATGCTTAGGGGATTACAAAGAGATTGAGATGTTGAGGGTTCTTCCTGGTTGTGGCCATGTCTTTCACCAAGCTTGTGTTGATCCATGGCTCATGTTACACTCCACATGCCCCATATGCCGAAAATCATTGCCACATGCACCATAG 465 0.4495 MIINNSNDSAFRFTHAMAFIFGLIFLFKTINFLHSCFFRPPRTPTILHTPVDVPSPYVSVSVAESLEHGHCHGHVDGHIDTGYENSPKMSYSDEVMKKSSVGGGCIICLGDYKEIEMLRVLPGCGHVFHQACVDPWLMLHSTCPICRKSLPHAP 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02872 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 153 IPR013083 -
Arst9g02872 154 ProSiteProfiles Zinc finger RING-type profile. 105 147 IPR001841 -
Arst9g02872 154 SUPERFAMILY RING/U-box 97 151 - -
Arst9g02872 154 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 150 IPR045899 -
Arst9g02872 154 Pfam Ring finger domain 105 147 IPR001841 -
Arst9g02872 154 SMART ring_2 105 146 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02872 Arst-Chr9 104263994 104264458 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02872 83 149 C3H Transcription Factor Family AT5G06490 56.716 3.67e-21 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02872 - - adu:107466495 320.857