Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02852 ATGGCAGGAAACTTCAGATTCACAATGGACCAAAAGGATATTGTTAGAATCTTGACAACAACCATCGATAGTTTCATTCAGGATCGATTAATCGACAAAGAACTAAGAGCTCAGCACAAAGAACAGTGTGCAGAGAGGTTAGCAGCTGAAGATGGAAGTTCTGAAAAAGACACTGAGGTAGAGTACTCTGATCAAGCAGTGTTAGCAAATCTTGATTGGGGTATCGAGGCACTTGAAGAAGCTATCAATACCTATAACACGGAAACTAAGCTTGCGAGACTCGATTATGCTGAGAAGATGCTGCAAGTTTGTGCAATGCTGAATCCTAAGCAAAAGACTGCTGGAGTGCCAAACTTCTACCTTTCAGCTTGGGCACATTTGAACCTATCATACCTATGGAAGTTGAGGAACAACATTCAGAATTGTGTTCTTCATGCCATTGACATGTTCATCGTTGATCCTTTTTTCGCTCGGATTGACTTTGCTCCAGAACTCTGGAAAACTCTCTTCCTTCCACACACGAGCTCTATTGTAGGGTGGTATTCAGAGGAGAGGCACAAACTTATGATGGAAGTAATACCTGAAACTTCTGATTTTTCAGTCACAGCTGATTTTGATCAACTTTTCAATGAATCCTTGGTATTCTCTCTGAGGCCAAATCAGTTAGATAAGTTGCAAAAACTGGAGCAGCTTTATGGAGAGTCTTTGGACGAGAACACGCGGCTATATGCAAAGTACTATAAGGACTGCATGAACTCTGATTCCACTACCTCAGGCAAGAAGGTTGTTCCCATGTTGCCAATTGCTGAGCCGCCAATGACTCCTTTGCATGAGTTGAGCAGGTCGGTTCCAGATTATGTGAAATTCGGTCCGATTTTGCCTAAGAGTGCTGGCTTTTCTTTGATGTCAATGCCAAAAGATGGTGTAAATGAAAAAACCAGAGATAAACCATCGAGCCATTCCAAGGTGGAAAACTCATCTATATGGGGTACTAAGGAGAGCATCATTGAAGAGAATGAAAATGAAAATGAAAATGAAGAAGATTCAGATTCTGATCTTGATGATGCATCTGTGGGTTCTCCTAACAAAAATAATGTTTTCTCGCCTGAAAGGAAGGCGATCAAGGACAATAATATTGAGCCAAAAGTGCATCTATCAAACCAAAGGAGTAAAATATACTCTCCTAGTATCTCCTCTCCCTTGGACTCTCCAAGAACTCCTCAAGACAAGTCGTCATTAAATCCTCATATGCGCAGCAAAAGAGAGCCGAAGTACTTGTGCTTATTGTCTAGTCGTTTAAGGGATTCGATCATTTCTGACTCTTTAACATCATCACCAGACCTGAGCACTGATCACATTATGAACTCTGATCATGAAATGATGGTGAACATTAAGAAGAAAGACTATAATCGAATTCCATGTATGAGTTATGAAAATGAGGATAGCCTGGTGCTAAATGACAGTTCTTTTTGTGAAAGTGATGAGGGATATCATGGCTGCATTTCATTGCCCAAAATAGAGAAGCAGACTACCGGATCAAAGCCGCCAAAAGATTTTGTATGTCCAATCACAGGTCAGATATTTTGTGATCCTGTTACCCTTGAAACAGGCCAGACCTATGAAAGAAAAGCTATTCAAGAATGGCTTAAAACAGGAAACACAACATGCCCCATCACGCGACAGCCTCTATCCGCAAGCATGTTACCCAAAACAAACTATGTTTTGAAGAGATTGATAACATCCTGGAAGGAACAACATCCTGAACTAGCTCAGGAGTTCTCAAATTCTAACACTAACACACCAAGGGGTTCTTCTTGTTCTCCATTGCAGAAAGACAACTCAATGCTGTCCATTTTACAAAGAACACCCGACTCAATGACTCATAAGAACAAAGCGGATTATATCATACAAAGGAGCAAGAGATTTATACAGGTTGCTGCAACATCTCCAACTAGTGTGCTATCTCAAGCTGCAGTTGAAACAATCATGAATTCCATGAAACCATACATTTCAAGTCTCTGCACATCAGAAAATTTACAAGAATGTGAAGAAGCTGTATTGGAAATTGCTAGATCATGGAAGGATGCAAAGAGTGATCCTCAGATTCATTCTTATTTATCAAAACCAACTGTCATAAACGGTTTAATGGAAATACTTTCAGCTTCTCTGAATGGAGAAGTTCTGAGGACAACAATTTACATCCTTACAGAGCTAATTTTTCTAGACGAAAGTGTCGGAGAGATACTTAACAGTGTAGATTCTGATTTTGATTGTTTGGCTGCTCTGCTCAAGAATGGTTTGGCTGAGGCAGCACTTCTGATTTATCAGCTAAGACCAGTTTTTGCTCAGCTATCAGCCCATGAGCTTATACCATCTCTAGTCCAAGTGATTCAGAACAAAAATGAGGAGTTGGATGATTTTCAATTAGTTATGGACCCGAAAGATGCCGCCATAGCAATTCTTGAACAAATATTAGCCGGAGGGGATGAATACAGCAGGTCCCTTAATGCTTTGAGTGTTATTTCAGCAAATGGAATTCCGGCATTGGTAAAATATTTCGAGAGGATGGAGGTAAGGACGTCTGTTGTTTCCATACTTTTGTGTTGTATGCAAGCTGAAAGAAGTTGCAAGAACTTGATAGCAAGTCGAGTCGAATTGTCTCCTGTTCTTGAATTATTTCATGGTGGAAATGATAGTGTGAAAGGCGTCTGCGCAGAATTTCTCTCCGAGCTGGTTCAATTGAATAGGAGAACTTTCTGCAACCAAATCTTACAGATAATCAAGGATGAAGGAGCATTTAGTACAATGCATACGTTTCTTGTATATCTTCAGATGGCTCCAATGGAGCATCAGCTTGCTGTTGCCAGTCTTCTTCTCCAGCTTGATCTTCTGGTGGAGCCACGAAAGATGAGCATTTATAGGGAAGAAGCTGTAGAGACACTAATTGAAGCACTTTGGCAAAAAGACTTCTCAAATACTCAAATTAAGGCTTTAGATGCTTTACTATATCTTATTGGACATGTCACTTCCTCAGGAAAGTCATATACTGAAGCCTGGTTGCTCAAGATCGCAGGATTCGATCAGCCTTACAACGCTTTAATGAAGGCCGAACAATTGGGACAACGTGACAATGATTTGGTGGAAACAATGGAGGATGAGAAAAATGCATTGAATTCTTGGCAGAAAAAGGTTGCATTTGTACTTTGCAACCATGAAAATGGTTCAATATTTAAAGCATTGGAAGAATGCTTAAGGAGTACTTCCCTAGAGATGGCAAAATCTTGCCTTGTTCTGGCAACATGGCTTACACACATGCTCTCTACGCTTCCTGACACCGGTATAAGGGACATTGCTCGTGAGTCATTGCTTGATGAATTCATAAATGTTCTACTGTCATCAAAGAACATGGAGGAAAAGATTCTTGCTAACCTAGCTTTGAATACTTTCATTAGTGATCCAATTGCTCATGAAGCACTTGGAGGCTATGCTAAAAGCATTTATAGGACCTTGAGGAAGCTAAAGAAACATTCAGCTGCAGCAGTTGATATTATGAGAACCTTACTAAACTTAAAATCTGTTGATGTGACTGAGTTGTGGAGTTGTAAAGAGGTTGTTGAGTTAGATTTGAGCTCAAACGGAGAAGTGCTTTCTTTGCTTTATCTGAATGGTCAGGTCTTGAGTGGACACTCTGATGGAACTATCAAGGTATGGGATGCAAGGAAGAGAATACCAAGAATCATTCAAGAAACTCGCGAGCACACAAAAGCTGTAACTTCTCTGTGTTCTTCAGGTGATAGACTCTACAGTGGTTCCTTAGACAAAACCATCCGGGTTTGGACTATCAAAGCCAATGAGATTATATGTATAGATGTTCATGATGTGAAGGAGGCAGTGTATGAGTTAACAGCAAATGCTAGATTGGCATGCTATGTGTCTCAAGGAACTGGAGCCAAGGTTTATAATTGGTCAGAGGCTCCAAAGCATATCAATTTCAGCAAGTATGTGAAATGCCTTGCTGTTGCCGGCGACAAATTGTATTGCGGCTGCTCCGGTTACAGCATTCAGGAGGTTGACTTGTCCAAACATACATCATATTCATTCTTCTCTGGTACAAGAAAATTATTGGGAAAACAAACCATACACGCCCTTCAAATTCATGATGGTTTCCTCTATGCCTGTGGATCTTCTGTTGATGCAACTGCAGGAAAGATATTTTCACTCTCCACCAAAATGGTAGTAGGATCACTATCGACTGGACTCGACATCCATCGTGTAGCCATCAACAATGACTTCATATTTGCAGGTACGAAGTTCGGCACCATTGAGGTTTGGCTGAAAGATAAGTTCACCCGGGTTGCTTCCATCAAAATGGCTGGTGGTAACACAAAAATCACATCATTAGTATCAGATGCGGATGGTATGATGCTTTTTGTTGGTTCCTCTGATGGAAAGATCCAGGTTTGGGCCTTGGATTAA 4476 0.4062 MAGNFRFTMDQKDIVRILTTTIDSFIQDRLIDKELRAQHKEQCAERLAAEDGSSEKDTEVEYSDQAVLANLDWGIEALEEAINTYNTETKLARLDYAEKMLQVCAMLNPKQKTAGVPNFYLSAWAHLNLSYLWKLRNNIQNCVLHAIDMFIVDPFFARIDFAPELWKTLFLPHTSSIVGWYSEERHKLMMEVIPETSDFSVTADFDQLFNESLVFSLRPNQLDKLQKLEQLYGESLDENTRLYAKYYKDCMNSDSTTSGKKVVPMLPIAEPPMTPLHELSRSVPDYVKFGPILPKSAGFSLMSMPKDGVNEKTRDKPSSHSKVENSSIWGTKESIIEENENENENEEDSDSDLDDASVGSPNKNNVFSPERKAIKDNNIEPKVHLSNQRSKIYSPSISSPLDSPRTPQDKSSLNPHMRSKREPKYLCLLSSRLRDSIISDSLTSSPDLSTDHIMNSDHEMMVNIKKKDYNRIPCMSYENEDSLVLNDSSFCESDEGYHGCISLPKIEKQTTGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLKTGNTTCPITRQPLSASMLPKTNYVLKRLITSWKEQHPELAQEFSNSNTNTPRGSSCSPLQKDNSMLSILQRTPDSMTHKNKADYIIQRSKRFIQVAATSPTSVLSQAAVETIMNSMKPYISSLCTSENLQECEEAVLEIARSWKDAKSDPQIHSYLSKPTVINGLMEILSASLNGEVLRTTIYILTELIFLDESVGEILNSVDSDFDCLAALLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVQVIQNKNEELDDFQLVMDPKDAAIAILEQILAGGDEYSRSLNALSVISANGIPALVKYFERMEVRTSVVSILLCCMQAERSCKNLIASRVELSPVLELFHGGNDSVKGVCAEFLSELVQLNRRTFCNQILQIIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQLDLLVEPRKMSIYREEAVETLIEALWQKDFSNTQIKALDALLYLIGHVTSSGKSYTEAWLLKIAGFDQPYNALMKAEQLGQRDNDLVETMEDEKNALNSWQKKVAFVLCNHENGSIFKALEECLRSTSLEMAKSCLVLATWLTHMLSTLPDTGIRDIARESLLDEFINVLLSSKNMEEKILANLALNTFISDPIAHEALGGYAKSIYRTLRKLKKHSAAAVDIMRTLLNLKSVDVTELWSCKEVVELDLSSNGEVLSLLYLNGQVLSGHSDGTIKVWDARKRIPRIIQETREHTKAVTSLCSSGDRLYSGSLDKTIRVWTIKANEIICIDVHDVKEAVYELTANARLACYVSQGTGAKVYNWSEAPKHINFSKYVKCLAVAGDKLYCGCSGYSIQEVDLSKHTSYSFFSGTRKLLGKQTIHALQIHDGFLYACGSSVDATAGKIFSLSTKMVVGSLSTGLDIHRVAINNDFIFAGTKFGTIEVWLKDKFTRVASIKMAGGNTKITSLVSDADGMMLFVGSSDGKIQVWALD 1491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02852 1491 MobiDBLite consensus disorder prediction 300 418 - -
Arst9g02852 1491 Pfam U-box domain 516 586 IPR003613 GO:0004842|GO:0016567
Arst9g02852 1491 MobiDBLite consensus disorder prediction 381 413 - -
Arst9g02852 1491 Gene3D - 663 942 IPR011989 -
Arst9g02852 1491 ProSiteProfiles Trp-Asp (WD) repeats profile. 1250 1289 IPR001680 GO:0005515
Arst9g02852 1491 Gene3D - 1186 1491 IPR015943 GO:0005515
Arst9g02852 1491 SMART Ubox_2 518 582 IPR003613 GO:0004842|GO:0016567
Arst9g02852 1491 ProSiteProfiles Trp-Asp (WD) repeats profile. 1457 1491 IPR001680 GO:0005515
Arst9g02852 1491 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1457 1491 - -
Arst9g02852 1491 PRINTS G protein beta WD-40 repeat signature 1225 1239 IPR020472 -
Arst9g02852 1491 PRINTS G protein beta WD-40 repeat signature 1267 1281 IPR020472 -
Arst9g02852 1491 PRINTS G protein beta WD-40 repeat signature 1476 1490 IPR020472 -
Arst9g02852 1491 SMART WD40_4 1448 1489 IPR001680 GO:0005515
Arst9g02852 1491 SMART WD40_4 1200 1238 IPR001680 GO:0005515
Arst9g02852 1491 SMART WD40_4 1243 1280 IPR001680 GO:0005515
Arst9g02852 1491 ProSiteProfiles Trp-Asp (WD) repeats profile. 1225 1238 IPR001680 GO:0005515
Arst9g02852 1491 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1250 1285 - -
Arst9g02852 1491 ProSiteProfiles U-box domain profile. 514 589 IPR003613 GO:0004842|GO:0016567
Arst9g02852 1491 Pfam WD domain, G-beta repeat 1249 1279 IPR001680 GO:0005515
Arst9g02852 1491 Pfam WD domain, G-beta repeat 1222 1238 IPR001680 GO:0005515
Arst9g02852 1491 MobiDBLite consensus disorder prediction 339 354 - -
Arst9g02852 1491 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 504 599 IPR013083 -
Arst9g02852 1491 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 1490 - -
Arst9g02852 1491 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 4 1490 - -
Arst9g02852 1491 SUPERFAMILY RING/U-box 513 587 - -
Arst9g02852 1491 MobiDBLite consensus disorder prediction 589 610 - -
Arst9g02852 1491 SUPERFAMILY ARM repeat 668 1152 IPR016024 -
Arst9g02852 1491 SUPERFAMILY WD40 repeat-like 1223 1490 IPR036322 GO:0005515
Arst9g02852 1491 CDD RING-Ubox_PUB 516 568 IPR045210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02852 Arst-Chr9 104115523 104124559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02852 516 632 U-box Gene Family AT3G54850 40.336 2.07e-16 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02852 - - gmx:100776142 2412.11