Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02824 ATGAATCATTTCTATCTGTCAGTATTTTTTATCTCTGATTTAACTGTCTTAAGGATCTATCTATATATGAAGGATACATTTCCAAAGATAGAAATCTTCACACAAAAGGAATTGCCAACTTGTTTGCAAGAAACGGCAATGGAATCAAAGTTTTTGGACAACGACAATGCAACCATAAGAAGTTCTCATCACTCTCTTACTGCTTCTCATCATGTTCATGCAAACTATTCAATGGAATCACCTGAAAGGCTTCTTTTATGTTCACATTCAATGAAAGAAGAGTTACCACCCTATGATGCCACTTTGATTGGCCATGTCCCTTCAAGTTTCCATGGCAATGAAGACACAAGAAATGGGCAAGAGAAAAACCATACCTTTCAAAAATTCAATAACAACCCTCTGAATCTATTGGAGACTCTGCCAGCATTAACCATAGCACCCTCTTCTTCTGATGCCTCACCACCTTCTTTGATTTCTCCTCCTTCGTCACACAAATTTCCAAACTTGACCTTGTTCTTGCAGGAAACTTCCATGCTCTACTCATCATCCTCGCATCTAAAAAGTGGTGAATCCATGTCATCAAAATCTTCAAACTCCACATTTCCATTGTCGCCACTCCGCCAAACTCAGTGCCAAACAACCACCGCCGATCCACACAAAATCACCAAGAATCTATCAAACATGAGGAGATCCAAGTCTTTCAGTGACCACCACAATTGGTTGAGCACAAGGACACAACCTCTTAAGTGCAGCGGCGGAGGTGGAAGAGTCAACAACAACAACAAGCTTTTCAAAGGGGTGAGACAAAGACACTGGGGAAAATGGGTTGCTGAGATAAGATTACCAAGAAACAGGACAAGGGTATGGTTAGGAACATTTGATACAGCTGAAGATGCAGCCATTGCATATGATACTGCAGCATATATACTAAGAGGAGATTATGCACAGTTGAATTTCCCTGAATTGAAGCATGTGATCAAGGCCAATTCTCTGAATGGAACCATTTCAGCACTCGTTGAGGCAAAACTACAAACAGTTCATCTGCATAAGAAGAATCCCAATAACAATAACAATAACAATAGCAGCAACAACAATTATGATGATTCACCACCATCAGCAGTTTCAGCATGCAAAAATAATGGCAATAAGGGTTCATCATCAAGCATAATGGAGTTGCAGTTAGAGGAAAATGAGAGAAGCAAAAGTGGCTCACTTTCTCATCATCAAGTTTTGGATGTGGAAGGTGTTCAATTGAGCAGAATGCCATCATTGGATATGGACCTTATTTGGGATGCACTTTTAGTCTCTGATTCATGA 1317 0.3994 MNHFYLSVFFISDLTVLRIYLYMKDTFPKIEIFTQKELPTCLQETAMESKFLDNDNATIRSSHHSLTASHHVHANYSMESPERLLLCSHSMKEELPPYDATLIGHVPSSFHGNEDTRNGQEKNHTFQKFNNNPLNLLETLPALTIAPSSSDASPPSLISPPSSHKFPNLTLFLQETSMLYSSSSHLKSGESMSSKSSNSTFPLSPLRQTQCQTTTADPHKITKNLSNMRRSKSFSDHHNWLSTRTQPLKCSGGGGRVNNNNKLFKGVRQRHWGKWVAEIRLPRNRTRVWLGTFDTAEDAAIAYDTAAYILRGDYAQLNFPELKHVIKANSLNGTISALVEAKLQTVHLHKKNPNNNNNNNSSNNNYDDSPPSAVSACKNNGNKGSSSSIMELQLEENERSKSGSLSHHQVLDVEGVQLSRMPSLDMDLIWDALLVSDS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02824 438 ProSiteProfiles AP2/ERF domain profile. 263 320 IPR001471 GO:0003700|GO:0006355
Arst9g02824 438 CDD AP2 262 322 IPR001471 GO:0003700|GO:0006355
Arst9g02824 438 PRINTS Ethylene responsive element binding protein signature 286 302 IPR001471 GO:0003700|GO:0006355
Arst9g02824 438 PRINTS Ethylene responsive element binding protein signature 264 275 IPR001471 GO:0003700|GO:0006355
Arst9g02824 438 MobiDBLite consensus disorder prediction 184 216 - -
Arst9g02824 438 Pfam AP2 domain 264 311 IPR001471 GO:0003700|GO:0006355
Arst9g02824 438 Gene3D AP2/ERF domain 263 321 IPR036955 GO:0003700|GO:0006355
Arst9g02824 438 SMART rav1_2 263 326 IPR001471 GO:0003700|GO:0006355
Arst9g02824 438 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 118 433 - -
Arst9g02824 438 MobiDBLite consensus disorder prediction 349 388 - -
Arst9g02824 438 SUPERFAMILY DNA-binding domain 263 320 IPR016177 GO:0003677
Arst9g02824 438 FunFam Ethylene-responsive transcription factor 2 262 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02824 Arst-Chr9 103603593 103604915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02824 165 433 AP2-EREBP Transcription Factor Family AT4G13620 44.280 1.70e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Arst9g02824 AP2 3.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02824 - - aip:107616692 706.827