Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02783 TTCATCAGCTTCATCACCAGCGAGGCATGTGAGAAGTGCCAGAAAGAGAAGAGGAAGACCATTAATGGAGATGATTTGTTATGGGCGATGGCCACTTTAGGATTTGAAGACTACATAGAACCTCTTAAAGTGTACCTAGCAAGATTCAGAGAGGGTGACACCAAAGGATCTGCTAGAACTAGCGATGGATCTGTTAGACGAGATCAAGTTGGTCTAGCGGGTCAAAATACTCAGCTTGTTCATCAGGGTTCACTGAATTATATTAGTTCCCAGGTGCAGCAACAACATTTGGTTATTCCTTCAATGCAAAGCCATGAATAG 321 0.4299 MADAPTSPANGSHESGGEQSPQESSSGGLCGAGAREQDRFLPIANISRIMKKGLPANGKIAKDAKDTMQECVSEFISFITSEACEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARFRELEGDTKGSARTSDGSVRRDQVGLAGQNTQLVHQGSLNYISSQVQQQHLVIPSMQSHE 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02783 182 SUPERFAMILY Histone-fold 37 161 IPR009072 GO:0046982
Arst9g02783 182 MobiDBLite consensus disorder prediction 1 33 - -
Arst9g02783 182 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 40 104 IPR003958 -
Arst9g02783 182 ProSitePatterns NF-YB/HAP3 subunit signature. 71 87 IPR003956 GO:0005634|GO:0006355|GO:0043565
Arst9g02783 182 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 26 154 IPR027113 GO:0001228|GO:0006355|GO:0016602
Arst9g02783 182 Gene3D Histone, subunit A 31 170 IPR009072 GO:0046982
Arst9g02783 182 MobiDBLite consensus disorder prediction 8 27 - -
Arst9g02783 182 FunFam Nuclear transcription factor Y subunit B-3 31 153 - -
Arst9g02783 182 PRINTS CCAAT-binding transcription factor subunit A signature 68 86 - -
Arst9g02783 182 PRINTS CCAAT-binding transcription factor subunit A signature 87 105 - -
Arst9g02783 182 PRINTS CCAAT-binding transcription factor subunit A signature 106 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02783 Arst-Chr9 102972148 102974946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02783 11 176 CCAAT-HAP3 Transcription Factor Family AT2G37060 68.862 3.12e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Arst9g02783 CBFD_NFYB_HMF 1.6e-28 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02783 K08065 - gmx:100779577 280.026