Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02704 ATGGTTGAGGGTATTCAGGTTAAAGATAAGTCACTTGATGATTATGATGTGAAAGTTTCATCAATTGATAAGAAAGACAATGGCTCAGTTCAGCCATATGATGATCAAACTGGGAAGAAGAAGATAGAGAAACCTGAATTGACTATTATTGACCATCCTACTATTGGAATGATTCCAAAGGCTGAAAAGGCAGAGCAAGTTTCAACAGGATGGCCGGATTGGCTTTCTTCTGTTGCTGGTGAAGCTATCAAGGGATGGATACCAAGGAGCGCAAATACTTTTGAAAGGTTACATAAAATTGGGCAAGGAACTTATAGTACTGTTTATAAGGCACGTGATGTGACTAATCAAAAGATTGTTGCATTAAAAAAGGTATATTTTGACAGTCTTAATCCTGAGAGCATCAAGTTTATGGCTAGAAAAATTCTTATTCTTCGTAGGCTCAACCATCCAAACATAATAAAGTTGGATAGCTTGATAACATCAGAGACATCCCACAACTTGTACCTTGTTTTTGAGTATATGGAACATGATCTTAAAGGGCTTGCATCAAATCCTGCCATTAAATTCTCTGAAGCACAGGTAAAATGCTACATGCAACAACTTCTTAGTGGATTGGATCATTGTCATAGTCATGGTGTCATCCATCGTAATATAAAGGGATCAAATATTCTCATTGACAACAATAATGTCTTAAAGATTGCAGATTTTGGTTTGGCAAATTTTTTTGACCCCTATCATAGTATTCCATTGACAAGTCGTGTTGTAACTCTTTGGTATAGACCACCAGAACTTTTACTCGGAGCAACCCATTATGGGGTTGCTGTAGATTTATGGAGCACTGGTTGCATATTAGGAGAACTATATAGTGGCAGACCTATATTGCCAGGAAAAACAGAGATTGAGCAGATACATCGAATTTTCAAACTTTGTGGTTCCCCATCTGATGATTATTGGATGAAATTGCGATTGCCACTTTCAACAGTATTCAAGTCTCCACACCATTATAGGAGATGTATTACAGACACATTCAAGGATTATCCACATGCTGCTGTGAAGCTTATAGAGACTTTACTATCTATTGATCCAACACACCGAGGGACAGCTGCCACTACTCTCAAAAGTGAGTTCTTTACATTAGAACCTCTGCCTTGTGATCCATCAAGCTTACCAAAATATCCTCCCAGCAAAGAAATCGACACCAAATTGCGAGATGAAGCAAGAAGAAGGCAGTGTTATGCTGGAGATAGAGAGAAAAAAATTGACTCAAGAGTTGGACAAGTATCAAGGACACATGTCACGTCAAAAGACAATATTGGTTCAAAAACATCAATGCAGATAGGAAATGAATCATTGTGA 1359 0.3782 MVEGIQVKDKSLDDYDVKVSSIDKKDNGSVQPYDDQTGKKKIEKPELTIIDHPTIGMIPKAEKAEQVSTGWPDWLSSVAGEAIKGWIPRSANTFERLHKIGQGTYSTVYKARDVTNQKIVALKKVYFDSLNPESIKFMARKILILRRLNHPNIIKLDSLITSETSHNLYLVFEYMEHDLKGLASNPAIKFSEAQVKCYMQQLLSGLDHCHSHGVIHRNIKGSNILIDNNNVLKIADFGLANFFDPYHSIPLTSRVVTLWYRPPELLLGATHYGVAVDLWSTGCILGELYSGRPILPGKTEIEQIHRIFKLCGSPSDDYWMKLRLPLSTVFKSPHHYRRCITDTFKDYPHAAVKLIETLLSIDPTHRGTAATTLKSEFFTLEPLPCDPSSLPKYPPSKEIDTKLRDEARRRQCYAGDREKKIDSRVGQVSRTHVTSKDNIGSKTSMQIGNESL 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02704 452 MobiDBLite consensus disorder prediction 413 452 - -
Arst9g02704 452 Pfam Protein kinase domain 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g02704 452 ProSiteProfiles Protein kinase domain profile. 94 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Arst9g02704 452 FunFam probable serine/threonine-protein kinase At1g54610 81 176 - -
Arst9g02704 452 CDD STKc_CDK9_like 94 378 - -
Arst9g02704 452 MobiDBLite consensus disorder prediction 427 452 - -
Arst9g02704 452 Gene3D Phosphorylase Kinase; domain 1 81 176 - -
Arst9g02704 452 PANTHER CELL DIVISION PROTEIN KINASE 92 384 - -
Arst9g02704 452 FunFam probable serine/threonine-protein kinase At1g54610 177 418 - -
Arst9g02704 452 SUPERFAMILY Protein kinase-like (PK-like) 87 384 IPR011009 -
Arst9g02704 452 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Arst9g02704 452 Gene3D Transferase(Phosphotransferase) domain 1 177 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02704 Arst-Chr9 100896149 100900199 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02704 86 419 Core Cell Cycle Gene Families AT5G10270 46.000 2.06e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Arst9g02704 Pkinase 1.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02704 - - adu:107466411 922.924