Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Arst9g02559 ATGAATTCATCAGAAGTTGAAGAAGAAGAAGAAGAAGCACAAGATCATCATGGAACCAAAAAGTCTTATGATTGCACATTCTGCAAGAGAGGCTTCACAAATGCTCAAGCTTTAGGGGGTCACATGAATATTCATAGAAGAGATAGGGCCAAGAACAAGCCTCATCTTCTTCATCACTCACCAAATTCCTCAAACAATAATCATCAAGAGGGAGAATTCATGTCCCTAAAATTCTCATCATCATCAACCCATGCTTTCGATTCTCAAAGGACCTATGACAACATGTATTTTCATCCACCTCCACCACCACCACCTAACGATTATCAAGTTAGGAAACATCAGCAACATGAACCACCATTTCAATTAGATCAATTTCATCATCAGCCTATGATGAATCTCAAGAATCAAGAGCTTCAAGGTGCCAATTTGAGTCTACAAATTTGCCCTACTAGTGATGATCAACATGTTATTAGAAGAAGAATTCACCAGCAAGATAGTGATGAAGTGGACTTGGAACTCAGACTCGGCCACCATCATCCATAA 543 0.3923 MNSSEVEEEEEEAQDHHGTKKSYDCTFCKRGFTNAQALGGHMNIHRRDRAKNKPHLLHHSPNSSNNNHQEGEFMSLKFSSSSTHAFDSQRTYDNMYFHPPPPPPPNDYQVRKHQQHEPPFQLDQFHHQPMMNLKNQELQGANLSLQICPTSDDQHVIRRRIHQQDSDEVDLELRLGHHHP 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Arst9g02559 180 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Arst9g02559 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Arst9g02559 180 MobiDBLite consensus disorder prediction 1 21 - -
Arst9g02559 180 PANTHER OS07G0101800 PROTEIN 4 178 - -
Arst9g02559 180 SUPERFAMILY beta-beta-alpha zinc fingers 20 49 IPR036236 -
Arst9g02559 180 Gene3D Classic Zinc Finger 6 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Arst9g02559 Arst-Chr9 94730836 94731378 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Arst9g02559 3 180 C2H2 Transcription Factor Family AT4G17810 30.055 4.33e-16 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Arst9g02559 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Arst9g02559 - - aip:107615854 332.798